I want to do Augustus training, but the rat model is not available on the list. Is there any other ways to do it?
And when I look at the Maker training set, I see that I have to use the ESTs and protein evidence databases. Where to find those databases? I have downloaded the rat (rn7.2) assembly dataset. Is it correct that I use the rna.fna file from the rn7.2 assembly as the ESTs or assembled cDNA and use the protein.fna from the rn7.2 assembly as the protein evidence? It seemed not working in this way, but what else I should use then?