Hi there,
I’ve been trying too run CCAT on the galaxy project website for peak calling on Arabidopsis ChIP-seq but I get the following error message:
Error running CCAT.
Traceback (most recent call last):
File “/opt/galaxy/shed_tools/toolshed.g2.bx.psu.edu/repos/devteam/ccat/a0c8dc671a23/ccat/ccat_wrapper.py”, line 41, in
if name == “main”: main()
File “/opt/galaxy/shed_tools/toolshed.g2.bx.psu.edu/repos/devteam/ccat/a0c8dc671a23/ccat/ccat_wrapper.py”, line 38, in main
return stop_err( tmp_dir, e )
File “/opt/galaxy/shed_tools/toolshed.g2.bx.psu.edu/repos/devteam/ccat/a0c8dc671a23/ccat/ccat_wrapper.py”, line 13, in stop_err
raise exception
AssertionError: The required chromosome length file does not exist.
Any idea ?
Jorge.