# LEfSe: tool request failed

**URL:** <https://help.galaxyproject.org/t/lefse-tool-request-failed/4063>\
**Category:** usegalaxy.org support\
**Tags:** galaxy-biobakery\
**Created:** [July 8, 2020, 2:57pm UTC](https://help.galaxyproject.org/t/lefse-tool-request-failed/4063 "2020-07-08T14:57:45Z")\
**Posts on this page:** 4\
**Page:** 1

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**Author:** ![Nevenka](https://avatars.discourse-cdn.com/v4/letter/n/c37758/32.png) [@Nevenka](https://help.galaxyproject.org/u/Nevenka)\
**Post date:** [July 8, 2020, 2:57pm UTC](https://help.galaxyproject.org/t/lefse-tool-request-failed/4063/1 "2020-07-08T14:57:45Z")

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Hi, I’m trying to run the first step of LEfSe microbiome analysis from Huttenhower lab  
[Galaxy](https://huttenhower.sph.harvard.edu/galaxy/) on the left menu, running:  
LEfSe: A) Format data for LEfSe

I’m getting the following error for the last two days:

#### 

“Tool request failed  
Uncaught exception in exposed API method:”

It worked just fine last week. Can someone point me to the right people?

Many thanks in advance, Nevenka

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**Author:** ![lulu1](https://avatars.discourse-cdn.com/v4/letter/l/7ea924/32.png) [@lulu1](https://help.galaxyproject.org/u/lulu1)\
**Post date:** [August 28, 2023, 11:34am UTC](https://help.galaxyproject.org/t/lefse-tool-request-failed/4063/2 "2023-08-28T11:34:19Z")

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I have encountered the same problem. Have you solved it ?

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**Author:** ![jennaj](https://sea2.discourse-cdn.com/flex020/user_avatar/help.galaxyproject.org/jennaj/32/27_2.png) [@jennaj](https://help.galaxyproject.org/u/jennaj)\
**Post date:** [August 28, 2023, 7:58pm UTC](https://help.galaxyproject.org/t/lefse-tool-request-failed/4063/3 "2023-08-28T19:58:38Z")

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Merging with [Data import LEfSe error: Cannot count lines in file - #6 by jennaj](https://help.galaxyproject.org/t/data-import-lefse-error-cannot-count-lines-in-file/10187/6)

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**Author:** ![jennaj](https://sea2.discourse-cdn.com/flex020/user_avatar/help.galaxyproject.org/jennaj/32/27_2.png) [@jennaj](https://help.galaxyproject.org/u/jennaj)\
**Post date:** [August 28, 2023, 7:59pm UTC](https://help.galaxyproject.org/t/lefse-tool-request-failed/4063/4 "2023-08-28T19:59:01Z")

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