I am trying to do the minimap2 with my own rat genome assembly against the reference rat genome. It went through well when I mapped against rn6 which is on the reference list. But when I tried to map agaisnt rn7 which is not on the list and had to upload as a seperate dataset, it failed constantly w…

Resolved, please try again now.

Mapping to a uploaded (large) reference genome dataset -- Platform Choices

daikez May 21, 2021, 7:27am 11

Another screenshot using the same dataset mapped against rn6 and now against rn7.2. Notice the size of the files generated with rn7.2 is only half of the one generated with rn6.0.

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Mapping to a uploaded (large) reference genome dataset -- Platform Choices

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