Welcome @Martin_Bartas
This is a screenshot from UseGalaxy.org. You could work here, too!
- How to move data by URL between Galaxy servers.
- Lots of data? Set up your account or target history to use the 30-day 1 TB storage space.
Another alternative is to use a Custom Reference genome from the history. This is a link to the same file we have indexed at UseGalaxy.org. Paste the link into the Upload tool at UseGalaxy.eu, use all default settings, and it will load up into your history.
TAIR10 genome fasta
How to select from the history
I put a copy here to make sure it works, so I’ll share it too. You could import and get a copy this way as well.
And .. I’ve also made a request to the UseGalaxy.eu server administrators. This is the tracking ticket to follow → Request: Add TAIR10 to list of genome builds for rbc_mirdeep2_mapper · Issue #1704 · usegalaxy-eu/infrastructure-playbook · GitHub
Hope this gives you some choices and one of these works out for you! Please let us know if it was enough or if you have any questions. 