Overlapping genelist

Jiahui · August 11, 2022, 11:39am

Hi all,
I have RNA-seq dataset for 3 different cell lines, and I followed the tutorial got the DE genes, I want to compare the overlapping up(/down) regulated genes, is there any tool that I can use to make this overlapping Venns graph or a list?

jennaj · September 21, 2022, 11:47pm

Hi @Jiahui

Please see the visualization tutorials here for examples

Topic		Replies	Views
Which tools shall I use to find out up and down regulation genes in RNA seq? Solution: GTN Transcriptomics & Differential expression tutorials usegalaxy.eu support gtn-tutorial , workflow	1	626	March 26, 2020
Visualize overlaps in multiple lines with two conditions each? usegalaxy.org support transcriptomics , limma , featurecounts	2	288	December 14, 2022
Deseq normalized values and RNA seq analysis	0	264	April 1, 2020
Differential Expressed genes usegalaxy.org support	2	428	December 3, 2018
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Overlapping genelist

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