Hi,
I am trying to run the first step of PICRUSt from Galaxy /Hutlab (Galaxy) which aims to “Normalize By Copy Number”.
I am using the template file proposed by the website (called sample file) but I am getting this error :
Traceback (most recent call last):
*** File “/galaxy-central/tools/picrust/scripts/normalize_by_copy_number.py”, line 146, in ***
*** main()***
*** File “/galaxy-central/tools/picrust/scripts/normalize_by_copy_number.py”, line 74, in main***
*** raise ValueEr***
Do you know what can I do to fix that ?
Hi. did you manage to resolve this? i am getting the same error and not sure what to do. thank you
Hi Shakthee,
I never managed to fix this problem.
So I decided to follow the authors pipeline, out of galaxy.https://github.com/picrust/picrust2/wiki/PICRUSt2-Tutorial-(v2.3.0-beta)
Good luck
Vince
jennaj
4
Hi @Shakthee_Silvaraju and @VinceBilly
To get help when working at this specific server, you’ll need to contact them directly as they do not track this forum,
General info:
