I’m trying to run STAR-fusion by using data from previous RNA STAR aligment and a plug’n play reference. These were the settings: STAR-Fusion Dataset Information Number: 484 Name: STAR-Fusion on data 477, data 90, and others: fusion_candidates.final Created: Sun Dec 20 00:02:25 2020 (UT…

@GACG1 What I notice first is that the reference GTF still has header lines. Remove those and confirm that the chromosome identifiers between all inputs are an exact match. Until those are done, we cannot determine if the data is actually too large or if the input format/content is contributing t…

RNA-star error (contact adminstrator) at UseGalaxy.org -- Resolved

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jennaj Split this topic May 17, 2021, 4:50pm 13

2 posts were split to a new topic: GTF data in Galaxy

Topic		Replies	Views
error with RNA STAR usegalaxy.org support rna-seq	1	126	April 17, 2024
Error with blast n+ for STAR fusion usegalaxy.org support mapping , blast	1	711	December 17, 2020
featureCounts_standard tool error_SUBREAD	2	507	August 12, 2021
Error with STAR usegalaxy.org support	3	1173	December 9, 2020
Error message when loading RNAStar usegalaxy.eu support server-open-issue	3	567	July 12, 2022

RNA-star error (contact adminstrator) at UseGalaxy.org -- Resolved

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