Salmon Auxiliary files - mapping stats

Hello,

I am using salmon for transcript and gene counts and according to the salmon documentation some auxiliary files are produced from the run which contain mapping stats. I was wondering how to obtain this file in Galaxy and if there is some way to perform multiqc on the salmon run to figure out the percent mapped ect similar to what i can do with featureCounts.

Thank you!

Hi @Ermela1,
an issue have been created in order to inform about your request: Salmon Auxiliary files - mapping stats.

It will be resolved soon.

Regards