Update 10/21/20 1pm EST: Resolved. Please rerun prior jobs that failed.
Update 10/20/20 7pm EST:
The correction is still pending. Ticket with details https://github.com/galaxyproject/usegalaxy-playbook/issues/311
Once confirmed to be fixed, that ticket will close out. It should be very soon
Correction in progress.
Tools with known issues (are likely more):
BWA-MEM and most other mapping tools
We can confirm the problem and are correcting it right now. It might be Monday before everything is done. Write back if still a problem on Tuesday for an update.
Meanwhile, you can do the same operation at usegalaxy.eu or usegalaxy.org.au.
Copy the link from a dataset’s “disk” icon and paste it into the other server’s
Upload tool to move data around. Some servers require that the history/datasets are in a shared state first. Do this under User > Histories > menu (gear) > Share or Publish. Choose the “share by URL” option making sure the box is checked to also share the objects inside of the history (eg datasets). Or, reset all permissions to share objects by default in user-defined ways under User > Preferences.
Each public server has the default data permissions set a bit differently, but these FAQs cover all of the sharing/permissions in case you get stuck: https://galaxyproject.org/support/#data-options
Thanks again for the followup, appreciated