# Trinity job delays at usegalaxy.org -- Solution: Server is busy allow jobs to complete

**URL:** <https://help.galaxyproject.org/t/trinity-job-delays-at-usegalaxy-org-solution-server-is-busy-allow-jobs-to-complete/5610>\
**Category:** usegalaxy.org support\
**Tags:** server-side-delay, queued-gray-datasets\
**Created:** [March 14, 2021, 8:28pm UTC](https://help.galaxyproject.org/t/trinity-job-delays-at-usegalaxy-org-solution-server-is-busy-allow-jobs-to-complete/5610 "2021-03-14T20:28:19Z")\
**Posts on this page:** 3\
**Page:** 1

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**Author:** ![Sammy](https://sea2.discourse-cdn.com/flex020/user_avatar/help.galaxyproject.org/sammy/32/445_2.png) [@Sammy](https://help.galaxyproject.org/u/Sammy)\
**Post date:** [March 14, 2021, 8:28pm UTC](https://help.galaxyproject.org/t/trinity-job-delays-at-usegalaxy-org-solution-server-is-busy-allow-jobs-to-complete/5610/1 "2021-03-14T20:28:19Z")

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Hello,

I am trying to perform a transcriptome assembly with Trinity for some paired-end reads (unaligned reads leftovers from a Bowtie alignment). I didn’t concatenate them previously so my input consists of 8-9 unaligned L fastas and 8-9 unaligned R fastas.

The job is still grey after a couple of hours. I know there have been issues in the past. Is it the same now or is it just a matter of time?

Thank you!!!

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**Author:** ![jennaj](https://sea2.discourse-cdn.com/flex020/user_avatar/help.galaxyproject.org/jennaj/32/27_2.png) [@jennaj](https://help.galaxyproject.org/u/jennaj)\
**Post date:** [March 17, 2021, 4:22pm UTC](https://help.galaxyproject.org/t/trinity-job-delays-at-usegalaxy-org-solution-server-is-busy-allow-jobs-to-complete/5610/2 "2021-03-17T16:22:41Z")

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Please see the reply here: [Trinity assembly running for 2 weeks](https://help.galaxyproject.org/t/trinity-assembly-running-for-2-weeks/5575)

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**Author:** ![jennaj](https://sea2.discourse-cdn.com/flex020/user_avatar/help.galaxyproject.org/jennaj/32/27_2.png) [@jennaj](https://help.galaxyproject.org/u/jennaj)\
**Post date:** [March 17, 2021, 4:22pm UTC](https://help.galaxyproject.org/t/trinity-job-delays-at-usegalaxy-org-solution-server-is-busy-allow-jobs-to-complete/5610/3 "2021-03-17T16:22:47Z")

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