# What are the steps to geta fasta file from a DiffBind interval file for doing motif search.

**URL:** <https://help.galaxyproject.org/t/what-are-the-steps-to-geta-fasta-file-from-a-diffbind-interval-file-for-doing-motif-search/6646>\
**Category:** usegalaxy.org support\
**Tags:** gtn-tutorial, workflow, development-tools\
**Created:** [September 8, 2021, 9:23am UTC](https://help.galaxyproject.org/t/what-are-the-steps-to-geta-fasta-file-from-a-diffbind-interval-file-for-doing-motif-search/6646 "2021-09-08T09:23:34Z")\
**Posts on this page:** 3\
**Page:** 1

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**Author:** ![Mercy\_Stephen](https://sea2.discourse-cdn.com/flex020/user_avatar/help.galaxyproject.org/mercy_stephen/32/2751_2.png) [@Mercy\_Stephen](https://help.galaxyproject.org/u/Mercy_Stephen)\
**Post date:** [September 8, 2021, 9:23am UTC](https://help.galaxyproject.org/t/what-are-the-steps-to-geta-fasta-file-from-a-diffbind-interval-file-for-doing-motif-search/6646/1 "2021-09-08T09:23:34Z")

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I got 5 files after using DiffBind tool.Now I want to find motifs from it.For that I think I need to get a fasta file for it.I want to know the steps for getting a fasta file!

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**Author:** ![gallardoalba](https://sea2.discourse-cdn.com/flex020/user_avatar/help.galaxyproject.org/gallardoalba/32/1903_2.png) [@gallardoalba](https://help.galaxyproject.org/u/gallardoalba)\
**Post date:** [September 8, 2021, 2:39pm UTC](https://help.galaxyproject.org/t/what-are-the-steps-to-geta-fasta-file-from-a-diffbind-interval-file-for-doing-motif-search/6646/2 "2021-09-08T14:39:56Z")

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Hi @Mercy_Stephen,  
you can use the **Extract Genomic DNA using coordinates** tool.

Regards

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**Author:** ![gallardoalba](https://sea2.discourse-cdn.com/flex020/user_avatar/help.galaxyproject.org/gallardoalba/32/1903_2.png) [@gallardoalba](https://help.galaxyproject.org/u/gallardoalba)\
**Post date:** [September 13, 2021, 10:23am UTC](https://help.galaxyproject.org/t/what-are-the-steps-to-geta-fasta-file-from-a-diffbind-interval-file-for-doing-motif-search/6646/3 "2021-09-13T10:23:43Z")

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Hi @Mercy_Stephen,  
the [findMotifsGenome](https://usegalaxy.eu/root?tool_id=toolshed.g2.bx.psu.edu/repos/iuc/homer_findmotifsgenome/homer_findMotifsGenome/4.11+galaxy0) tool is now available in [usegalaxy.eu](http://usegalaxy.eu).

Regards