# Would it be possible for galaxy to include Camelus dromedarius reference genome in built in index ? **URL:** \ **Category:** Uncategorized\ **Tags:** reference-index, custom-genome, reference-genome, custom-build\ **Created:** [August 1, 2023, 6:27am UTC](https://help.galaxyproject.org/t/would-it-be-possible-for-galaxy-to-include-camelus-dromedarius-reference-genome-in-built-in-index/10555 "2023-08-01T06:27:45Z")\ **Posts on this page:** 5\ **Page:** 1
**Author:** ![sagar\_khulape](https://avatars.discourse-cdn.com/v4/letter/s/c2a13f/32.png) [@sagar\_khulape](https://help.galaxyproject.org/u/sagar_khulape)\ **Post date:** [August 1, 2023, 6:27am UTC](https://help.galaxyproject.org/t/would-it-be-possible-for-galaxy-to-include-camelus-dromedarius-reference-genome-in-built-in-index/10555/1 "2023-08-01T06:27:45Z")
Would it be possible for galaxy to include Camelus dromedarius reference genome in built in index ? ---
**Author:** ![jennaj](https://sea2.discourse-cdn.com/flex020/user_avatar/help.galaxyproject.org/jennaj/32/27_2.png) [@jennaj](https://help.galaxyproject.org/u/jennaj)\ **Post date:** [August 7, 2023, 7:58pm UTC](https://help.galaxyproject.org/t/would-it-be-possible-for-galaxy-to-include-camelus-dromedarius-reference-genome-in-built-in-index/10555/2 "2023-08-07T19:58:06Z")
Hi @sagar_khulape **For now:** Use the custom genome method. See [Custom genome + custom build: How to use a genome that is not natively indexed at the server you are working at](https://help.galaxyproject.org/t/custom-genome-custom-build-how-to-use-a-genome-that-is-not-natively-indexed-at-the-server-you-are-working-at/10082) **For later (later this year, or early next)** We can likely index the genome at the public servers. We will need to know the exact assembly, and it should be from a stable public source with a version. A link is usually the best way to specify that. Hope that helps! ---
**Author:** ![sagar\_khulape](https://avatars.discourse-cdn.com/v4/letter/s/c2a13f/32.png) [@sagar\_khulape](https://help.galaxyproject.org/u/sagar_khulape)\ **Post date:** [August 14, 2023, 10:06am UTC](https://help.galaxyproject.org/t/would-it-be-possible-for-galaxy-to-include-camelus-dromedarius-reference-genome-in-built-in-index/10555/3 "2023-08-14T10:06:42Z")
Thank you for the response The Camelus dromedarius genome can be found at [Camelus dromedarius genome assembly CamDro3 - NCBI - NLM](https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000803125.2/) The list for genome sequence for assembly as - NC\_044511.1, NC\_044512.1, NC\_044513.1, NC\_044514.1, NC\_044515.1, NC\_044516.1, NC\_044517.1, NC\_044518.1, NC\_044519.1, NC\_044520.1, NC\_044521.1, NC\_044522.1, NC\_044523.1, NC\_044524.1, NC\_044525.1, NC\_044526.1, NC\_044527.1, NC\_044528.1, NC\_044529.1, NC\_044530.1, NC\_044531.1, NC\_044532.1, NC\_044533.1, NC\_044534.1, NC\_044535.1, NC\_044536.1, NC\_044537.1, NC\_044538.1, NC\_044539.1, NC\_044540.1, NC\_044541.1, NC\_044542.1, NC\_044543.1, NC\_044544.1, NC\_044545.1, NC\_044546.1, NC\_044547.1, NC\_009849.1 Could you help out to include said genome as index for mapping in galaxy ---
**Author:** ![jennaj](https://sea2.discourse-cdn.com/flex020/user_avatar/help.galaxyproject.org/jennaj/32/27_2.png) [@jennaj](https://help.galaxyproject.org/u/jennaj)\ **Post date:** [August 15, 2023, 4:48pm UTC](https://help.galaxyproject.org/t/would-it-be-possible-for-galaxy-to-include-camelus-dromedarius-reference-genome-in-built-in-index/10555/4 "2023-08-15T16:48:32Z")
Ok, great, thanks for posting back. UCSC hosts many of the genomes as well, so that is probably where we will get it. That is where you could get it as well to avoid having to merge chromosome file together. [https://hgdownload.soe.ucsc.edu/hubs/UCSC\_GI.assemblyHubList.txt](https://hgdownload.soe.ucsc.edu/hubs/UCSC_GI.assemblyHubList.txt) > GCF\_000803125.2 CamDro3 Camelus dromedarius Arabian camel (Drom800 2019 refseq) 9838 mammals I’ll mark this for updates later. Thanks! ---
**Author:** ![sagar\_khulape](https://avatars.discourse-cdn.com/v4/letter/s/c2a13f/32.png) [@sagar\_khulape](https://help.galaxyproject.org/u/sagar_khulape)\ **Post date:** [August 16, 2023, 3:38am UTC](https://help.galaxyproject.org/t/would-it-be-possible-for-galaxy-to-include-camelus-dromedarius-reference-genome-in-built-in-index/10555/5 "2023-08-16T03:38:35Z")
Thank you madam response it will be a great help to person working on camel welfare and genomics Thanks​