bed

Topic Replies Views Activity
How to interpret bedcov tools output?
bed ,  coverage
4 232 June 7, 2022
Sort on BED file
usegalaxy.org support
bed ,  text-manipulation
3 61 March 25, 2022
Q: Which steps should I follow to answer this question? A: Using the tool "Group" to summarize data
usegalaxy.eu support
bed ,  text-manipulation
1 191 April 21, 2021
How to filter FreeBayes output (vcf) file to specific region (SNP) bed file in usegalaxy
vcf ,  bed ,  freebayes ,  snp ,  usegalaxy
1 317 February 4, 2021
Extract Genomic DNA Invalid Lines Error
usegalaxy.org support
bed ,  custom-genome ,  input ,  tabular ,  custom-build
6 353 January 22, 2021
How to delete rows with the same number in the bed file in usegalaxy
bed ,  usegalaxy
2 283 December 11, 2020
Extract Genomic DNA- Chromosome was not found for hg19
usegalaxy.org support
bed ,  error ,  extract
2 320 November 20, 2020
Bedtools Closest Error
usegalaxy.org support
bed ,  text-manipulation ,  input ,  format ,  troubleshooting
1 587 September 11, 2020
Tools to get precise annotated genomic regions for bedgraph input data
bed ,  feature-annotation
5 1172 February 6, 2020
Extract Genomic DNA won't work
usegalaxy.org support
fasta-manipulation ,  bed ,  fasta ,  tabular ,  custom-build
3 1064 December 11, 2019
Extract Genomic DNA: index not found for hg19
usegalaxy.eu support
bed ,  index ,  chip-seq ,  server-side-error ,  extract
4 563 December 2, 2019
I need a tool that can extract bases before a certain position
bed ,  fasta
12 938 July 24, 2019
Help with extracting genome sequences
usegalaxy.org support
bed ,  fasta ,  extract
2 737 February 27, 2019
Error executing tool: formatting problem with BED dataset
usegalaxy.org support
upload ,  bed ,  text-manipulation ,  format ,  error
2 1489 January 30, 2019
UniProt SignalP Predictions: How tobautomatically remove predicted signal equence from FASTA
uniprot ,  fasta-manipulation ,  bed ,  text-manipulation ,  fasta
5 676 December 17, 2018