Topics tagged blast

Topic	Replies	Views	Activity
how to get the MadLandDB mentioned in this tutorial? gtn-tutorial , mapping , blast , makeblastdb	4	300	November 11, 2024
Searching one large sequence for a smaller sequence usegalaxy.org support troubleshooting , mapping , blast , ncbi_blastn_wrapper	1	11	September 30, 2024
Please run Megablast as an option with BLASTN usegalaxy.eu support mapping , blast , tool-help , ncbi_blastn_wrapper , megablast_wrapper	8	87	August 18, 2024
RPStblastn subject defline(s) usegalaxy.org support troubleshooting , blast	3	105	April 29, 2024
NCBI BLAST+ rpstblastn mapping , blast , tool-help	2	127	April 25, 2024
NCBI+ blastp and GALAXY_SLOTS - increase number of threads server-admin , ncbi , galaxy-local , blast , blastp	3	507	December 19, 2023
Filter reference/subject sequences based on mapping usegalaxy.eu support text-manipulation , mapping , blast	3	201	December 12, 2023
Merging GFF3 files? server-admin , workflow , blast	2	593	December 7, 2023
trouble in galaxy shed blast	4	683	December 7, 2023
How to do functional annotation after maker usegalaxy.eu support blast	3	964	December 7, 2023
How to perform nr blast (Blast2GO) usegalaxy.eu support blast	2	489	December 7, 2023
Blast2Go through Galaxy blast	8	762	December 7, 2023
Blast2GO Errors usegalaxy.eu support troubleshooting , blast	6	956	December 7, 2023
Error code at end of Funannotate functional annotation usegalaxy.org.au support troubleshooting , blast , funannotate , eggnog_mapper_search	4	516	January 21, 2025
Request for megablast tool usegalaxy.eu support reference-index , mapping , blast	3	257	November 3, 2023
Bowtie2 filtering reads mapping , blast	1	559	September 28, 2023
compare Galaxy europe aligners (bowtie2, BWA and minimap2) and CLC genomics workbench usegalaxy.eu support mapping , blast	11	786	September 27, 2023
trinity from HISAT2 unaligned reads usegalaxy.eu support assembly , troubleshooting , mapping , blast	4	294	September 6, 2023
Busco not working for a particular dataset usegalaxy.eu support blast , genome-annotation , exceeds-memory-error	7	797	August 30, 2023
Updating databases usegalaxy.eu support reference-index , blast	2	428	August 21, 2023
emote job server indicated a problem running or monitoring this job usegalaxy.org support blast	3	288	July 1, 2023
abricate and VFDB blast , igv	1	446	June 9, 2023
Blast2GO not working usegalaxy.eu support tool-dev , blast , server-status	16	826	December 7, 2023
import dataset NCBI usegalaxy.eu support gtn-tutorial , upload , blast , third-party-identities	11	421	May 12, 2023
Error in Stringtie Results usegalaxy.org support mapping , blast , transcriptomics , rna-seq , deseq2 , stringtie , featurecounts	3	850	December 21, 2023
Selective elimination of Sequences using tools usegalaxy.org support blast	3	417	April 26, 2023
Roary troubleshooting (version 3.13.0+galaxy2 or later) assembly , blast	3	901	March 23, 2023
BlastP frozen at start blast , makeblastdb	9	330	March 22, 2023
roary core genome alignment file is empty. (resolved) usegalaxy.org support assembly , blast	12	1912	March 7, 2023
Funannotate functional annotation usegalaxy.org.au support blast , funannotate , eggnog_mapper_search	2	614	February 10, 2023