Topics tagged collections

Topic	Replies	Views	Activity
Why collections? Resources news , dataset , collections , resources Collections are one of the super-killer features of Galaxy! By Anton Nekrutenko October 21, 2025	2	11	October 21, 2025
FASTQ Paired Reads Splitter? collections , datasets	3	14	October 22, 2025
Kraken2 error message on paired-end collection. Not analyzing all samples usegalaxy.eu support troubleshooting , collections	3	15	October 14, 2025
Panaroo & PanTA: sample recognition troubleshooting usegalaxy.eu support collections , tool-help	4	26	October 8, 2025
Why can’t separate files be used in FASTP? Creating a paired end collection folder (data shapes and organization) usegalaxy.org support collections , fastp	5	18	October 1, 2025
Collection folder VIDEO: How to create a single or paired end dataset collection folder (shapes and organization) Resources collections , resources , tool-help , metawrapmg_binning	3	20	September 29, 2025
How do I use galaxy tools to create a paired end collection folder (data shapes and organization) Resources collections , resources	2	49	December 3, 2024
Collection to separate files usegalaxy.eu support collections	1	5	September 22, 2025
Creating folders/segregate files usegalaxy.org support history , collections	3	18	September 3, 2025
Alleyoop - unable to select dataset collections for bam, tsv, and vcf files collections , browse-upload-files	3	14	August 5, 2025
Concatenate multiple datasets tool; combining all fastq.gz files under a single barcode to one fastq.gz file collections , tool-help	6	165	July 22, 2025
Random failures when concatenating fastqsanger.gz datasets via collection– "Not in GZIP format" errors usegalaxy.org support collections	3	17	July 22, 2025
How can I rename a paired Fastq file? Resources collections , resources , fastq_manipulation	4	45	June 24, 2025
Extract dataset history , collections , tool-help , __extract_dataset__	1	9	June 12, 2025
Format issues while trying yo use rnaviralspades usegalaxy.eu support collections , tool-help , spades_rnaviralspades	2	16	June 11, 2025
uploading metadata file usegalaxy.eu support transcriptomics , collections , __apply_rules__ , upload-rule-based	2	13	May 22, 2025
Map with BWA-MEM usegalaxy.eu support bwa-mem , collections	1	20	May 12, 2025
My collection displays as a python object, not files paths tool-dev , collections	2	11	April 29, 2025
Build dataset list usegalaxy.org.au support gtn-tutorial , collections	6	56	April 22, 2025
Need help flattening collections! usegalaxy.eu support collections	2	23	April 11, 2025
Fastp - Collection usegalaxy.eu support collections , fastp	1	21	March 28, 2025
Is there a way to merge collections with different structures? Or merge collections inside a list? usegalaxy.eu support collections , merge-collections	13	69	March 26, 2025
Quality Control Start Here! multQC issue and guidance? Resources multiqc , troubleshooting , collections , resources , quality-control , fastqc	1	89	March 3, 2025
OrthoFinder not accepting FASTA collections? usegalaxy.eu support workflow , collections	2	50	February 27, 2025
De-multiplex paired-end reads usegalaxy.org support collections , tool-help , __apply_rules__	1	30	October 30, 2024
.fastq.gz dataset not showing up in fastqc usegalaxy.eu support collections	4	89	October 30, 2024
plotCoverage bin count names usegalaxy.org support relabel-collection , collections , tool-help	2	20	October 29, 2024
Create a collection from a tabular file usegalaxy.org support workflow , text-manipulation , collections	2	28	October 28, 2024
MultiQC not working correctly multiqc , collections , quality-control	10	2571	July 9, 2024
Multiple files after demultiplexing using radtags - what files do I use for mapping/SNP calling etc.,? usegalaxy.eu support mapping , stacks , collections	1	171	June 6, 2024