Topics tagged collections

Topic	Replies	Views	Activity
Why collections? Resources news , dataset , collections , resources Collections are one of the super-killer features of Galaxy! By Anton Nekrutenko October 21, 2025	0	89	October 21, 2025
Choosing datafiles for DESeq2 usegalaxy.eu support collections , tags , select	2	7	December 9, 2025
How do I create and visualize a nested paired list collections	1	17	November 3, 2025
Salmon Quant paired-end read entry usegalaxy.eu support troubleshooting , collections	1	27	November 3, 2025
Cannot match collection types collections , cutadapt , tool-help , rna_star	2	35	November 2, 2025
FASTQ Paired Reads Splitter? collections , datasets	3	53	October 22, 2025
Kraken2 error message on paired-end collection. Not analyzing all samples usegalaxy.eu support troubleshooting , collections	3	42	October 14, 2025
Panaroo & PanTA: sample recognition troubleshooting usegalaxy.eu support collections , tool-help	4	58	October 8, 2025
Why can’t separate files be used in FASTP? Creating a paired end collection folder (data shapes and organization) usegalaxy.org support collections , fastp	5	52	October 1, 2025
Collection folder VIDEO: How to create a single or paired end dataset collection folder (shapes and organization) Resources collections , resources , tool-help , metawrapmg_binning	3	52	September 29, 2025
How do I use galaxy tools to create a paired end collection folder (data shapes and organization) Resources collections , resources	2	78	December 3, 2024
Collection to separate files usegalaxy.eu support collections	1	17	September 22, 2025
Creating folders/segregate files usegalaxy.org support history , collections	3	28	September 3, 2025
Alleyoop - unable to select dataset collections for bam, tsv, and vcf files collections , browse-upload-files	3	31	August 5, 2025
Concatenate multiple datasets tool; combining all fastq.gz files under a single barcode to one fastq.gz file collections , tool-help	6	201	July 22, 2025
Random failures when concatenating fastqsanger.gz datasets via collection– "Not in GZIP format" errors usegalaxy.org support collections	3	31	July 22, 2025
How can I rename a paired Fastq file? Resources collections , resources , fastq_manipulation	4	69	June 24, 2025
Extract dataset history , collections , tool-help , __extract_dataset__	1	22	June 12, 2025
Format issues while trying yo use rnaviralspades usegalaxy.eu support collections , tool-help , spades_rnaviralspades	2	28	June 11, 2025
uploading metadata file usegalaxy.eu support transcriptomics , collections , __apply_rules__ , upload-rule-based	2	34	May 22, 2025
Map with BWA-MEM usegalaxy.eu support bwa-mem , collections	1	30	May 12, 2025
My collection displays as a python object, not files paths tool-dev , collections	2	23	April 29, 2025
Build dataset list usegalaxy.org.au support gtn-tutorial , collections	6	76	April 22, 2025
Need help flattening collections! usegalaxy.eu support collections	2	42	April 11, 2025
Fastp - Collection usegalaxy.eu support collections , fastp	1	42	March 28, 2025
Is there a way to merge collections with different structures? Or merge collections inside a list? usegalaxy.eu support collections , merge-collections	13	102	March 26, 2025
Quality Control Start Here! multQC issue and guidance? Resources multiqc , troubleshooting , collections , resources , quality-control , fastqc	1	165	March 3, 2025
OrthoFinder not accepting FASTA collections? usegalaxy.eu support workflow , collections	2	71	February 27, 2025
De-multiplex paired-end reads usegalaxy.org support collections , tool-help , __apply_rules__	1	41	October 30, 2024
.fastq.gz dataset not showing up in fastqc usegalaxy.eu support collections	4	114	October 30, 2024