Topics tagged collections

Topic	Replies	Views	Activity
Why collections? Resources news , dataset , collections , resources Collections are one of the super-killer features of Galaxy! By Anton Nekrutenko October 21, 2025	0	123	October 21, 2025
Error in using Bowtie2 troubleshooting , mapping , collections , resources	2	29	December 18, 2025
Choosing datafiles for DESeq2 usegalaxy.eu support collections , tags , resources , tool-help , deseq2 , select	3	45	December 9, 2025
How do I create and visualize a nested paired list collections	1	22	November 3, 2025
Salmon Quant paired-end read entry usegalaxy.eu support troubleshooting , collections , resources	2	31	December 23, 2025
Cannot match collection types collections , cutadapt , tool-help , rna_star	2	42	November 2, 2025
FASTQ Paired Reads Splitter? collections , datasets	3	57	October 22, 2025
Kraken2 error message on paired-end collection. Not analyzing all samples usegalaxy.eu support troubleshooting , collections	3	50	October 14, 2025
Panaroo & PanTA: sample recognition troubleshooting usegalaxy.eu support collections , tool-help	4	94	October 8, 2025
Bowtie2 -- Paired end samples? Use a List of Pairs collection! mapping , collections , resources , tool-help , bowtie2	5	108	October 3, 2025
Why can’t separate files be used in FASTP? Creating a paired end collection folder (data shapes and organization) usegalaxy.org support collections , fastp	5	75	October 1, 2025
Collection folder VIDEO: How to create a single or paired end dataset collection folder (shapes and organization) Resources collections , resources , tool-help , metawrapmg_binning	3	66	September 29, 2025
How do I use galaxy tools to create a paired end collection folder (data shapes and organization) Resources collections , resources	2	96	December 3, 2024
Collection to separate files usegalaxy.eu support collections	1	21	September 22, 2025
Creating folders/segregate files usegalaxy.org support history , collections	3	40	September 3, 2025
Alleyoop - unable to select dataset collections for bam, tsv, and vcf files collections , browse-upload-files	3	38	August 5, 2025
Concatenate multiple datasets tool; combining all fastq.gz files under a single barcode to one fastq.gz file collections , tool-help	6	229	July 22, 2025
Random failures when concatenating fastqsanger.gz datasets via collection– "Not in GZIP format" errors usegalaxy.org support collections	3	54	July 22, 2025
How can I rename a paired Fastq file? Resources collections , resources , fastq_manipulation	4	85	June 24, 2025
Extract dataset history , collections , tool-help , __extract_dataset__	1	36	June 12, 2025
Format issues while trying yo use rnaviralspades usegalaxy.eu support collections , tool-help , spades_rnaviralspades	2	38	June 11, 2025
uploading metadata file usegalaxy.eu support transcriptomics , collections , __apply_rules__ , upload-rule-based	2	44	May 22, 2025
Map with BWA-MEM usegalaxy.eu support bwa-mem , collections	1	38	May 12, 2025
My collection displays as a python object, not files paths tool-dev , collections	2	29	April 29, 2025
Build dataset list usegalaxy.org.au support gtn-tutorial , collections	6	104	April 22, 2025
Need help flattening collections! usegalaxy.eu support collections	2	55	April 11, 2025
Fastp - Collection usegalaxy.eu support collections , fastp	1	56	March 28, 2025
Is there a way to merge collections with different structures? Or merge collections inside a list? usegalaxy.eu support collections , merge-collections	13	134	March 26, 2025
Quality Control Start Here! multQC issue and guidance? Resources multiqc , troubleshooting , collections , resources , quality-control , fastqc	1	193	March 3, 2025
OrthoFinder not accepting FASTA collections? usegalaxy.eu support workflow , collections	2	88	February 27, 2025