comp-chemistry
| Topic | Replies | Views | Activity | |
|---|---|---|---|---|
| Free energy landsape using Bio3d in galaxy |
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5 | 26 | August 18, 2025 |
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CHARMM36 force field for gromacs
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2 | 16 | August 12, 2025 |
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Error in GROMACS solvation and ading ions
|
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1 | 31 | October 15, 2024 |
| Cannot analyze MD simulation using GROMACS - error 127 |
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2 | 481 | September 15, 2023 |
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Generate a topology for the ligand
|
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10 | 549 | August 7, 2023 |
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Group Protein_UNK referenced in the .mdp file was not found in the index file.
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1 | 944 | April 1, 2023 |
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error due to time limit
|
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4 | 696 | December 20, 2023 |
| Merge Gromacs Topologies tool not found? |
|
5 | 871 | September 23, 2022 |
| To run longer simulation like 100ns |
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2 | 341 | September 23, 2022 |
| Free Energy Calculation from DCD Trajectory? |
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1 | 643 | September 21, 2022 |
| Position restraints error !!! |
|
6 | 958 | August 31, 2022 |
| Error when trying to use GROMACS on PDB of Protein-Protein Complex |
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4 | 891 | March 21, 2022 |
| Tool error in protein-ligand md simulation in Gromacs |
|
13 | 2439 | September 6, 2021 |