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Reference genome not in database offered by galaxy - Solution: Use a custom genome
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7
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107
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December 7, 2021
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Any way to align a single cDNA sequence against the raw nanopore data?
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2
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83
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October 25, 2021
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Gaps in the genome assembly
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0
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78
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August 31, 2021
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Reference geneome
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1
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133
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August 10, 2021
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HISAT2 alignment results in very low in number of mapped reads
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7
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267
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August 7, 2021
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Do I need to convert genomic.fna.gz file to fasta for custom genomes, if so, how?
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4
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160
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June 29, 2021
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MethylDackel running time too long
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18
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232
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June 15, 2021
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Extract a subsequence from the whole genome assembly?
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11
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100
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June 11, 2021
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Mapping to a uploaded (large) reference genome dataset -- Platform Choices
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14
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321
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June 9, 2021
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Very long running time for RepeatMasker?
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9
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144
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May 21, 2021
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Download genome into Galaxy
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9
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1317
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May 12, 2021
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Failed BLAST+ jobs: Tips and formatting help for successful index creation with makeblastdb
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4
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206
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April 21, 2021
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Error in Naive Variant Caller (NVC) in usegalaxy.org -- Resolved
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7
|
209
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February 15, 2021
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Custom reference genome annotation
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4
|
161
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January 25, 2021
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Extract Genomic DNA Invalid Lines Error
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6
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273
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January 22, 2021
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How to solve the problem related to unmatched chromosome identifiers?
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1
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132
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January 4, 2021
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Identification of Cre-recombinase in ScRNAseq data
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3
|
203
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January 2, 2021
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Please add the Xenopus laevis reference genome to Galaxy -- Indexing already planned, use a Custom Genome/Build for now
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6
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318
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December 18, 2020
|
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scRNAseq Galaxy workflow
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13
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851
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December 11, 2020
|
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Uploading A. thaliana reference genome to RNA STAR
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1
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157
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November 30, 2020
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Alternative to DM tools for inbuilt reference sequence
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3
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288
|
November 30, 2020
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RNA Star alignment to opposum monDom5 genome
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1
|
166
|
November 10, 2020
|
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Baboon reference genome
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2
|
145
|
October 30, 2020
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Request for including 2x fungal genomes in the GALAXY reference genome list
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2
|
215
|
October 29, 2020
|
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Another STAR error -- Resolved
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8
|
702
|
October 2, 2020
|
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Mitochondrial genome
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4
|
288
|
September 20, 2020
|
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Extracting sequences from bed file using tools extract Genomic DNA tool and bed to Fasta tool
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3
|
727
|
June 30, 2020
|
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HISAT2 and job stages, resources, PLAZA genomes, avoiding deprecated tools
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1
|
186
|
May 19, 2020
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MiRDeep2 identification of novel and known miRNAs
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28
|
2169
|
May 19, 2020
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RNA seq analysis: deprecated tools, updated tools, learning resources
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2
|
1119
|
May 15, 2020
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