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How to solve problems in edgeR?
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2
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33
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March 13, 2025
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DESeq2 or EdgeR or Limma without replication
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9
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4844
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February 14, 2025
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Error running edgeR
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4
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60
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September 3, 2024
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edgeR analysis help
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1
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41
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July 29, 2024
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edgeR troubleshooting
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1
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181
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April 17, 2024
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Help with Salmon and edgeR
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2
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629
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April 17, 2024
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DeSeq2 Fatal Error - US.UTF-8 cannot be honored
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4
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1054
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November 1, 2023
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Analyze TCGA data and count table
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0
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363
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August 10, 2023
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EdgeR doesn´t run with count matrix in tabular format (obtained from mirDeep2 Quantifier)
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1
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607
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May 2, 2023
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Dexseq stuck on 'Installing tools dependencies' on local instance of Galaxy
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3
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2011
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April 21, 2023
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From TXIMPORT to EdgeR?
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1
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327
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March 6, 2023
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edgeR cannot run
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2
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764
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November 28, 2022
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Differentially expressed genes
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14
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1138
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November 11, 2022
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edgeR Error Message
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1
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825
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October 6, 2022
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Error running edgeR DEG Please help.
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3
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1985
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September 23, 2022
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edgeR error in galaxy
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1
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473
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May 20, 2022
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Comparing expression of DEG gene in samples
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2
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368
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May 18, 2022
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EdgeR and Limma jobs not executing
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1
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440
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April 26, 2022
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Help with error during building an expression matrix
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1
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1091
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November 29, 2021
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What advanced parameters which need to be set for analysing ATAC seq replicates using edgeR in usegalaxy.org ?
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1
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518
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September 13, 2021
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We did our analysis using edgeR and we got many gene but when we used Diffbind we got less no of chromosome regions ?
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1
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718
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September 13, 2021
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What are the Parameters for using DiffBind for analysing ATAC-seq in usegalaxy.org
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2
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604
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September 11, 2021
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Not able to filter out my edgeR gene results when I put filter on column 6 for FDR<0.05 .It shows no results and al the values in the FDR column are greater than 0.3.Is there a problem with the parameters I had set for edgeR?
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0
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441
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September 10, 2021
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Multi factor error for DESeq2
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4
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832
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August 17, 2021
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Problem with DESeq2
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5
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738
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September 23, 2022
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DEseq2 error with different numbers of rows
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13
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2767
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December 21, 2023
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Help with odd MA/MD plot?
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0
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525
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June 24, 2021
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difference output differentially expressed genes by Cuffdiff, Deseq2, edgreR
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1
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671
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May 23, 2021
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edgeR output not available in workflows
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0
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317
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April 21, 2021
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edgeR differential expression for replicates calculation
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1
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898
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April 19, 2021
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