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Help with chipseq workflow to find motifs and genome ontology data
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2
|
340
|
September 17, 2022
|
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MACS2 scientific result troubleshooting
|
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6
|
857
|
June 16, 2022
|
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MACS2 narrowpeaks results are empty when adding an input
|
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2
|
568
|
June 16, 2022
|
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MACS2 gives no error but I am getting zero peaks as well…problem or not a problem?
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4
|
1180
|
June 15, 2022
|
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How to 'force=TRUE' in Human Methylation BeadChip module
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6
|
475
|
June 8, 2022
|
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diffbind update
|
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5
|
726
|
December 21, 2023
|
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FRiP score chip-seq
|
|
2
|
1008
|
April 4, 2022
|
|
DiffBind_ChIP-seq_Error
|
|
9
|
566
|
March 3, 2022
|
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Half of the heatmap generated by plotheatmap became black
|
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0
|
406
|
February 11, 2022
|
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Fatal error in CHIPseeker
|
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1
|
956
|
January 20, 2022
|
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chip seq analysis using single end
|
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1
|
385
|
January 3, 2022
|
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Tool for merging 2x single-read illumina sequencing files (fastq) into one?
|
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7
|
661
|
November 5, 2021
|
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Different total numbers of regions after bedtools Multiple Intersect function
|
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3
|
581
|
October 4, 2021
|
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How to get gene list from fasta sequence file.
|
|
1
|
946
|
September 10, 2021
|
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Incorrect number of dimensions: Infinium Human Methylation BeadChip
|
|
1
|
783
|
July 21, 2021
|
|
DiffBind Chip-Seq error
|
|
5
|
1303
|
July 15, 2021
|
|
Update Request -- Diffbind
|
|
1
|
390
|
June 5, 2021
|
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Diffbind error: Not enough y observations
|
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3
|
1411
|
May 28, 2021
|
|
Need more Galaxy storage
|
|
1
|
710
|
May 9, 2021
|
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PCA analysis of bed files
|
|
1
|
775
|
March 7, 2021
|
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Request for including 2x fungal genomes in the GALAXY reference genome list
|
|
2
|
795
|
October 29, 2020
|
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Some tools have disconnected genome indexes post server updates -- Resolved issue UseGalaxy.org
|
|
10
|
1052
|
October 21, 2020
|
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Job running slow
|
|
0
|
371
|
October 2, 2020
|
|
Usegalaxy, ChIPSeq, bedtools Intersect intervals, Blacklist regions
|
|
0
|
656
|
August 14, 2020
|
|
No difference in peaks between ChIP sample and control / Bad background noise on control for ChIP-Seq / Weak enrichment for ChIP-Seq
|
|
0
|
640
|
July 10, 2020
|
|
Filter SAM or BAM, output SAM or BAM files
|
|
1
|
1614
|
May 26, 2020
|
|
MEME Memory Allocation Problem
|
|
0
|
340
|
May 8, 2020
|
|
Bowtie2 Stalled, Running to long
|
|
0
|
551
|
May 6, 2020
|
|
Link ChIP-seq`s peaks with nearby genes
|
|
3
|
871
|
April 1, 2020
|
|
Associate peaks (from ChIP-seq) with nearby genes
|
|
0
|
488
|
March 25, 2020
|