Topics tagged fastq

Topic	Replies	Views	Activity
How to upload .fastq? usegalaxy.org support upload , fastq , fastqgz , fastq-format-error , fastqsanger	3	85	January 11, 2023
FASTQGroomer Error usegalaxy.org support fastq , qa-qc , fastqsanger	2	89	September 30, 2022
Tool usage fastq-join usegalaxy.org support fastq , data-manipulation	1	129	August 14, 2022
Merging FASTA files fasta-manipulation , text-manipulation , dataset-collection , fastq , qa-qc	3	451	July 22, 2022
Fastq de-interlace usegalaxy.eu support fastq	1	106	July 19, 2022
split FASTQ files based on Illumina indexes in the ID usegalaxy.org support fastq	2	267	September 21, 2022
fastq vs fastqsanger fastq , fastqsangergz , fastqsanger , datatype	3	635	May 10, 2022
Trimmomatic error paired-end fastq fastq , qa-qc , trimmomatic , fastqsangergz	2	274	February 23, 2022
UMI-tools Extract not working fastq	1	235	January 5, 2022
Metagenomics analysis: Tutorials tutorial , upload , fastq , metagenomics , qa-qc	9	353	October 5, 2021
Failing to load single-cell raw fastq files into Galaxy usegalaxy.org support fastq , ncbi , upload-by-url	1	288	September 20, 2021
NCBI SRA Fastq (convert SRA files from GEO into fastq files) usegalaxy.org support metadata , fastq , sra	7	458	June 22, 2021
renaming reads with barcode using cutadapt text-manipulation , fastq , qa-qc	8	439	June 4, 2021
hisat2 low overall aligment rate fastq , mapping , qa-qc , hisat2 , fastqsanger	2	205	May 27, 2021
Installing fastx_barcode_splitter_enhanced -- multiplexed reads, barcodes, tools fastq	6	333	May 25, 2021
Trimmomatic error; encountered a tool detected error fastq , qa-qc , trimmomatic , fastqsanger , datatypes	6	411	May 4, 2021
Fastqsanger to fastq fastq , fastqsanger , datatype	3	551	April 25, 2021
Fastq Manipulation: Trimming user-specified regions usegalaxy.eu support fastq , qa-qc	3	500	April 21, 2021
Batch concatenate reads fastq , galaxy-local	4	434	April 21, 2021
Filtering reads based on a sequence usegalaxy.org support fastq , filter	2	287	April 7, 2021
how to configure fastq_dump on a local galaxy build on aws ec2? fastq , sra , galaxy-local	0	327	March 5, 2021
fastqsanger.gz file not recognized in usegalaxy.org usegalaxy.org support dataset-collection , fastq , ncbi , mapping , fastqsangergz	11	1837	February 25, 2021
Get selected reads from SRA data sets usegalaxy.org support fastq , sra , filter	0	340	December 1, 2020
Keep getting an error when trying to use CANU assembler with Oxford Nanopore reads dataset-collection , fastq , assembly , fastqgz , datatype	7	802	July 20, 2020
Problem processing Paired end collections with MiniMap2 dataset-collection , fastq , error , mapping , collections	11	1479	July 2, 2020
How to change fastq header? usegalaxy.eu support text-manipulation , fastq	5	1391	October 13, 2022
Collapse Sequences Failure usegalaxy.org support admin , fasta , fastq , troubleshooting , error	0	357	February 24, 2020
fasta to fastq; fastsanger.gz to fastq; SRA to fastq fastq , ncbi , sra , fastqsangergz , fastqsanger	3	2598	February 11, 2020
Difficulty in getting SRA into Galalxy usegalaxy.org support bam , fastq , ncbi , fastqsangergz , fastqsanger	6	1615	December 18, 2019
Trinity seems to be hanging fastq , trinity , fastqsangergz , server-side-delay , fastqsanger	7	580	February 10, 2023