Topics tagged fastq

Topic	Replies	Views	Activity
Batch concatenate reads fastq , galaxy-local	2	32	April 19, 2021
Filtering reads based on a sequence usegalaxy.org support fastq , filter	2	50	April 7, 2021
how to configure fastq_dump on a local galaxy build on aws ec2? fastq , sra , galaxy-local	0	56	March 5, 2021
fastqsanger.gz file not recognized in usegalaxy.org usegalaxy.org support dataset-collection , fastq , ncbi , mapping , fastqsangergz	11	679	February 25, 2021
Get selected reads from SRA data sets usegalaxy.org support fastq , sra , filter	0	74	December 1, 2020
Keep getting an error when trying to use CANU assembler with Oxford Nanopore reads dataset-collection , fastq , assembly , fastqgz , datatype	7	247	July 20, 2020
Problem processing Paired end collections with MiniMap2 dataset-collection , fastq , error , mapping , collections	11	400	July 2, 2020
How to change fastq header? usegalaxy.eu support text-manipulation , fastq	4	426	June 3, 2020
Collapse Sequences Failure usegalaxy.org support admin , fasta , fastq , troubleshooting , error	0	153	February 24, 2020
fasta to fastq; fastsanger.gz to fastq; SRA to fastq fastq , ncbi , sra , fastqsangergz , fastqsanger	3	925	February 11, 2020
Difficulty in getting SRA into Galalxy usegalaxy.org support bam , fastq , ncbi , fastqsangergz , fastqsanger	6	813	December 18, 2019
Trinity seems to be hanging fastq , trinity , fastqsangergz , server-side-delay , fastqsanger	6	234	December 13, 2019
Fastq Manipulation: Trimming user-specified regions usegalaxy.eu support fastq , qa-qc	2	174	November 27, 2019
Trim Galore error due to problematic fastq format usegalaxy.eu support fastq , format , fastq-format-error	7	1782	November 26, 2019
Question about tool errors in an older Galaxy release admin , jobs , fastqc , dataset , fastq	3	413	October 26, 2019
Uploading and processing data created by other programs workflow , fasta , fastq , galaxy-local	1	157	October 16, 2019
bowtie2 fatal error message usegalaxy.org support dataset , fastq , bowtie2 , fastq-format-error	4	367	September 12, 2019
Should or can paired-end fastq be converted to single-end fastq -- and the reverse? usegalaxy.org support fastq , fastq-format-error	5	376	July 3, 2019
Convert from BAM to fastq usegalaxy.org support fastq , input , fastqsanger	18	850	May 29, 2019
How to extract unique reads from SAM file usegalaxy.org support bam , fastq , sam	1	544	May 29, 2019
'Bam to fastq' programs on Windows ? usegalaxy.org support bam , fastq	2	221	May 21, 2019
Paird-end Fastq-dump Manipulation - Fastq De-Interlacer rna-seq , fastq	3	1113	May 7, 2019
problem in assembly of pacbio sequences fasta , fastq , input	1	340	May 6, 2019
HELP for ddRAD de novo map analysis usegalaxy.eu support tutorial , fastq , galaxy-local , stacks , stacks2	0	205	May 2, 2019
How consider both paired ends ddRAD reads in de novo map analysis usegalaxy.eu support admin , workflow , fastq	0	140	April 22, 2019
Trinity error in usegalaxy.org site usegalaxy.org support fastq , trinity , format	6	504	April 15, 2019
Fastq.gz data does not open on Windows -- RE: Incomplete download or incompatible gz compression usegalaxy.org support fastq , fastqgz	2	196	April 11, 2019
How to convert fastqsanger to fasta usegalaxy.org support download , fastq , fastqsangergz , fastqgz	3	1206	April 11, 2019
Unexpected result from tool Fastq Splitter usegalaxy.org support fastq , ncbi , fastq-splitter , fastq-deinterlacer	5	432	February 26, 2019
Error with Bowtie2 tool usegalaxy.org support fastq , error , qa-qc , bowtie2	1	340	February 22, 2019