Topics tagged fastqc

Topic	Replies	Views	Activity
Server issue at UseGalaxy.org September 2, 2022 -- Status = RESOLVED usegalaxy.org support fastqc , server-side-error	2	87	September 2, 2022
regd fastqc ouput usegalaxy.eu support fastqc , qa-qc	1	87	August 26, 2022
regarding MULTIQC not working usegalaxy.eu support fastqc , multiqc , dataset-collection , collections	4	114	July 26, 2022
Trouble downloading and unzipping data usegalaxy.org support fastqc , download , curl , wget , server-open-issue	3	99	July 22, 2022
fastqc read quality reports jobs , fastqc , queued-gray-datasets	1	98	June 30, 2022
MultiQC does not recognize raw data (txt) from FastQC when in a collection fastqc , multiqc , dataset-collection	2	99	May 2, 2022
MultiQC not working correctly fastqc , multiqc , dataset-collection , tool-error	6	445	March 11, 2022
too much time for start a job? Troubleshooting Trinity inputs + QA/QC steps for RNA-seq assembly usegalaxy.org support fastqc , trinity , qa-qc , trimmomatic , fastq-deinterlacer	5	768	June 7, 2021
de novo assembly using Trinity in Galaxy fastqc , assembly , trinity , trimmomatic , fastqsanger	7	3288	February 25, 2020
FastQC reports from list of pairs PE Illumina reads all have sample name "forward" or "reverse" fastqc , multiqc , galaxy-local	5	238	May 28, 2021
what tools approprite for remove duplicate reads from BAM file in Usegalaxy rna-seq , fastqc , bam , usegalaxy	3	649	April 19, 2021
RNA seq HiSAT2 pipeline - slurmstepd: error: Detected 1 oom-kill usegalaxy.org support fastqc , multiqc , qa-qc , trimmomatic , fastq-format-error	3	494	November 9, 2020
FASTQC GC content fail: rRNA detection usegalaxy.org support rna-seq , fastqc	0	581	October 1, 2020
Error in MultiQC usegalaxy.eu support fastqc , multiqc , troubleshooting	5	1688	September 19, 2020
make.contigs/16S Microbial Analysis with Mothur fastqc , mothur , queued-gray-datasets	6	815	August 17, 2020
FastQC doesn't work usegalaxy.org support fastqc , error , ftp-upload	15	5715	July 16, 2020
RNA Seq Analysis - Trimming, FastQC usegalaxy.eu support rna-seq , fastqc	0	376	July 16, 2020
Question about tool errors in an older Galaxy release admin , jobs , fastqc , dataset , fastq	3	691	October 26, 2019
Samtools IdxStats: interpreting and troubleshooting unmapped reads fastqc , mapping , qa-qc , samtools	2	2769	August 10, 2019
FastQC HTML file not visible -- Add tool to HTML display "whitelist" admin , fastqc , whitelist , html	7	988	July 12, 2019
How to merge or generate FASTA file with the same chromosome usegalaxy.org support admin , fastqc	5	1541	December 12, 2018
FastQC failing for conda venv issue at Galaxy Main https://usegalaxy.org -- Status: Fixed, please rerun usegalaxy.org support fastqc , server-side-error	5	383	June 21, 2019
how Find illumina adapter for cutadapt usegalaxy.org support fastqc , trimmomatic , adaptors	1	425	May 24, 2019
RNASeq analysis, FastQC usegalaxy.org support fastqc	0	280	April 7, 2019
bowtie2 mapping warnings fastqc , fastq , chip-seq	4	1631	January 7, 2019
How do you use MultiQC on FastQC files taken from SRA files? usegalaxy.org support fastqc , multiqc , dataset-collection	1	1495	December 10, 2018
Problems with the tutorial data rna-seq , tutorial , fastqc	4	1145	December 6, 2018