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In featurecounts I got 69% assigned but count matrix full of zeros
|
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4
|
47
|
November 4, 2021
|
|
What can i do with genes that appear as NA but have statistics ?
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4
|
95
|
September 28, 2021
|
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Should i change de EntrezID of my genes if it has changed in NCBI?
|
|
2
|
90
|
September 16, 2021
|
|
Does enabling the FeatureCounts fractions will calculate only multimapping(NH) or also overlapping?
|
|
1
|
76
|
August 29, 2021
|
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Does FeatureCount Built-in include non coding region?
|
|
2
|
110
|
August 19, 2021
|
|
Counting reads or fragments for Pair-End data?
|
|
0
|
89
|
August 1, 2021
|
|
Difference Between using mm10 vs GRCm38 GFF/GTF
|
|
1
|
118
|
July 19, 2021
|
|
DEseq2 error with different numbers of rows
|
|
12
|
415
|
May 13, 2021
|
|
Unassigned Multimapping in featurecounts
|
|
9
|
3624
|
June 15, 2021
|
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below 50 percents of reads are assigned in featurecount
|
|
15
|
141
|
June 13, 2021
|
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The use of different built-in reference genomes -- Reference annotation + Reference genome for RNA-seq analysis
|
|
4
|
132
|
May 20, 2021
|
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Unassigned_Ambiguity problem in featureCounts
|
|
4
|
182
|
May 10, 2021
|
|
annotateMyIDs fatal error code 1
|
|
3
|
150
|
May 3, 2021
|
|
miRNA featureCounts
|
|
1
|
198
|
April 15, 2021
|
|
Cuffdiff bam sort error
|
|
1
|
126
|
April 13, 2021
|
|
Problems with the tool featureCounts: Fatal error: Exit code 255 ()
|
|
2
|
628
|
January 9, 2021
|
|
Unable to use featurecounts tool
|
|
2
|
403
|
January 9, 2021
|
|
How to solve the problem related to unmatched chromosome identifiers?
|
|
1
|
132
|
January 4, 2021
|
|
featureCounts high Unassigned_NoFeatures - New to RNA-seq!
|
|
1
|
451
|
November 10, 2020
|
|
FeatureCounts No Features
|
|
3
|
380
|
November 10, 2020
|
|
Featurecounts tool update request
|
|
19
|
662
|
August 20, 2020
|
|
StringTie or FeatureCounts
|
|
2
|
1017
|
June 26, 2020
|
|
How to generate counts from my HISAT2 alignment (BAM file)?
|
|
1
|
745
|
June 9, 2020
|
|
Job running longer than a week
|
|
4
|
376
|
May 27, 2020
|
|
featureCount and Bowtie jobs taking too long.
|
|
0
|
207
|
May 17, 2020
|
|
Unassiged_nofeatures featurecounts results
|
|
1
|
345
|
December 19, 2019
|
|
Very few genes in htseqCount-/FeatureCounts-Output
|
|
6
|
751
|
December 10, 2019
|
|
feature counts built-in genome not available
|
|
1
|
223
|
September 16, 2019
|
|
Seeking advice on amount of ambiguity in featureCounts
|
|
7
|
913
|
September 9, 2019
|
|
ref_gene_id featurecounts
|
|
6
|
1686
|
May 22, 2019
|
