Topics tagged freebayes

Topic	Replies	Views	Activity
How to calculate allelic imbalance in usegalaxy rna-seq , variant , freebayes , snp , usegalaxy	2	266	March 17, 2021
GATK4 baserecalibrator usegalaxy.org support variant , freebayes , gatk4	4	549	March 17, 2021
How to filter FreeBayes output (vcf) file to specific region (SNP) bed file in usegalaxy vcf , bed , freebayes , snp , usegalaxy	1	457	February 4, 2021
Error FreeBayes freebayes , usegalaxy	0	211	December 25, 2020
How to filter rare variants (10%) out variant , freebayes	4	400	September 18, 2019
FreeBayes: installing onto local instance of Galaxy tool-install , freebayes , galaxy-local , conda , conda-dependency	3	501	September 13, 2019
Calculating variant allele frequency from FreeBayes VCF variant , freebayes	3	3227	July 4, 2019
Help!! Variant calling on BAM with Freebayes taking a long time to process freebayes	3	560	May 25, 2019
Change pileup to vcf format allowing for great depth (100.000 reads)??? usegalaxy.org support mpileup , vcf , variant , varscan , freebayes	1	887	December 6, 2018