freebayes

Topic Replies Views Activity
How to calculate allelic imbalance in usegalaxy
rna-seq ,  variant ,  freebayes ,  snp ,  usegalaxy
2 138 March 17, 2021
GATK4 baserecalibrator
usegalaxy.org support
variant ,  freebayes ,  gatk4
4 203 March 17, 2021
How to filter FreeBayes output (vcf) file to specific region (SNP) bed file in usegalaxy
vcf ,  bed ,  freebayes ,  snp ,  usegalaxy
1 169 February 4, 2021
Error FreeBayes
freebayes ,  usegalaxy
0 110 December 25, 2020
How to filter rare variants (10%) out
variant ,  freebayes
4 249 September 18, 2019
FreeBayes: installing onto local instance of Galaxy
tool-install ,  freebayes ,  galaxy-local ,  conda ,  conda-dependency
3 284 September 13, 2019
Calculating variant allele frequency from FreeBayes VCF
variant ,  freebayes
3 2112 July 4, 2019
Help!! Variant calling on BAM with Freebayes taking a long time to process
freebayes
3 387 May 25, 2019
Change pileup to vcf format allowing for great depth (100.000 reads)???
usegalaxy.org support
mpileup ,  vcf ,  variant ,  varscan ,  freebayes
1 634 December 6, 2018