Topics tagged genome

Topic	Replies	Views	Activity
linking BUSCO genes to GO/functional terms for genome genome , genome-annotation , annotation , gene	0	170	May 13, 2022
MiRDeep2 identification of novel and known miRNAs usegalaxy.eu support genome , mirna , custom-genome	28	3423	May 19, 2020
Unable to determine location of rsync data for all_fasta (human b38) data-manager , admin , rsync , genome	5	570	February 21, 2020
Features of built-in genomes usegalaxy.eu support reference-genome , genome	2	535	January 10, 2020
Genome request: Human herpesvirus 1 at NCBI accession NC_001806. Immediate solution: use a Custom genome/build usegalaxy.org support custom-build , custom-genome , reference-genome , genome	2	482	December 4, 2019
Add new version of reference genome: Tribolium castaneum (red flour beetle) Tcas5.2 usegalaxy.org support genome , reference-genome , custom-build , database , custom-genome	2	602	December 4, 2019
Fasta format genome file in mirdeep2 (custom genome) usegalaxy.eu support custom-genome , genome , mirna	3	1090	September 4, 2019
Allowed makeblastdb file size (1GB), cut genome to smaller pieces? usegalaxy.org support blast , database , fasta , genome	2	1594	September 3, 2019
bwa-mem does not map to entire reference genome data-manager , index , galaxy-local , genome	10	1982	July 15, 2019
Does default hg38 build version contain alt contigs? A note on built-in reference genomes genome , hg38 , mapping	2	884	May 28, 2019
Adding zebrafish genome builds to HiSat and Star aligners usegalaxy.eu support database , reference-genome , star-index , genome , hisat2-index	12	1190	April 30, 2019
Bam file to fasta file - Genome assembly usegalaxy.org support assembly , genome , bam , fasta	3	3159	February 6, 2019