Ensembl gene annotation gtf for rat problem with RNA STAR
|
|
2
|
19
|
February 26, 2025
|
UCSC Reference Genome and GTF Fatal Error no valid exons in the GTF file
|
|
3
|
44
|
January 22, 2025
|
Possible to map reads against multiple separate references at once?
|
|
2
|
10
|
January 15, 2025
|
Determining Primary, Intermediate, and Mature Mitochondrial Transcripts??
|
|
1
|
4
|
December 9, 2024
|
IGV Download Problem
|
|
3
|
26
|
December 5, 2024
|
RNAstar Select Reference Genome - Species Not Available - contact the Galaxy team (--genomeDir)
|
|
1
|
14
|
December 4, 2024
|
Galaxy & Kubernetes
|
|
7
|
38
|
November 28, 2024
|
Map with minimap2, no secondary alignment
|
|
1
|
37
|
November 26, 2024
|
Bowtie2 reference genome of Goat (Capra Hircus)
|
|
1
|
13
|
November 25, 2024
|
how to get the MadLandDB mentioned in this tutorial?
|
|
4
|
300
|
November 11, 2024
|
Interproscan format issues
|
|
3
|
24
|
November 7, 2024
|
hisat2 and featurecounts
|
|
23
|
2024
|
October 28, 2024
|
Cant get bowtie to work
|
|
2
|
16
|
October 25, 2024
|
jobs running too slow
|
|
2
|
35
|
October 25, 2024
|
HISAT2 output error
|
|
3
|
85
|
October 21, 2024
|
Discard parts of sequence not mapped to reference
|
|
2
|
19
|
October 18, 2024
|
Variant calling with VarScan on WGS data
|
|
5
|
59
|
October 12, 2024
|
NCBI BLAST+ blastx
|
|
1
|
21
|
October 10, 2024
|
Can users increase the number of threads used for jobs?
|
|
1
|
29
|
October 10, 2024
|
Searching one large sequence for a smaller sequence
|
|
1
|
11
|
September 30, 2024
|
Question about Minimap2 and nanopore reads
|
|
1
|
42
|
September 17, 2024
|
Map with BWA-MEM problem - An error occurred with this dataset: bam format
|
|
3
|
92
|
September 17, 2024
|
Need Help with Mapping Genome Skimming Data and Generating Consensus Sequences in Galaxy
|
|
1
|
30
|
September 16, 2024
|
Optimizing STAR Mapping for Large-Scale Genome Annotation: Managing Memory Overflows in RNA-Seq Workflows
|
|
6
|
39
|
September 10, 2024
|
I am using HISAT2, but my reference genome Rickettsia rickettsii is missing in the dropdown list.
|
|
15
|
56
|
August 23, 2024
|
Please run Megablast as an option with BLASTN
|
|
8
|
87
|
August 18, 2024
|
DeepVariant low quality sorting
|
|
1
|
54
|
July 31, 2024
|
The accuracy of re-blasting known sequences of human gut microbes is very low
|
|
1
|
5
|
July 29, 2024
|
DIAMOND --all option not working
|
|
3
|
117
|
July 22, 2024
|
RNA alignment not detecting indels
|
|
5
|
95
|
June 17, 2024
|