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DeepVariant low quality sorting
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1
|
156
|
July 31, 2024
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The accuracy of re-blasting known sequences of human gut microbes is very low
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1
|
19
|
July 29, 2024
|
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DIAMOND --all option not working
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3
|
199
|
July 22, 2024
|
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RNA alignment not detecting indels
|
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5
|
198
|
June 17, 2024
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Multiple files after demultiplexing using radtags - what files do I use for mapping/SNP calling etc.,?
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1
|
228
|
June 6, 2024
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Bowtie2: how to normalize reads by spike in
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1
|
190
|
May 24, 2024
|
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RNA STAR length of the genomic sequence around annotated junctions
|
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2
|
213
|
May 2, 2024
|
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Blastn issue; what is the alternative tool?
|
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4
|
302
|
April 25, 2024
|
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NCBI BLAST+ rpstblastn
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2
|
189
|
April 25, 2024
|
|
Bowtie2 and BWA aligners
|
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7
|
837
|
March 22, 2024
|
|
Too many duplicated sequences OR unassigned because of mapping quality
|
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2
|
2557
|
March 20, 2024
|
|
HISAT2 crash/failure
|
|
7
|
1787
|
March 20, 2024
|
|
HISAT2 job killed due to not enough memory allocated for the job
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5
|
883
|
March 19, 2024
|
|
Diamond troubleshooting
|
|
7
|
369
|
February 9, 2024
|
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Mapping with STAR Error
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5
|
387
|
January 26, 2024
|
|
RNA STAR stuck on running
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2
|
268
|
December 23, 2023
|
|
Je-Demultiplex outputs not working in alignment stage
|
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0
|
318
|
September 16, 2021
|
|
Galaxy Docker - Error for all but 2 parallel jobs
|
|
0
|
322
|
April 20, 2022
|
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HiSat reference genomce seq.fasta GRCh38 does not work and HiSat2 does not accept other ref.seq.fasta
|
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0
|
473
|
May 27, 2022
|
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Resolved: Tools are missing in my account usegalaxy.org (main server)
|
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7
|
659
|
December 15, 2023
|
|
Filter reference/subject sequences based on mapping
|
|
3
|
277
|
December 12, 2023
|
|
Time for Running RNA Seq Workflow
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|
1
|
348
|
December 1, 2023
|
|
BBtools: BBmap aligned
|
|
2
|
232
|
November 30, 2023
|
|
Testing Pulsar (GTN archive 2023-11-01) errors
|
|
1
|
247
|
November 29, 2023
|
|
There are no locally cached or built-in genomes on use.galaxy.org
|
|
1
|
283
|
November 29, 2023
|
|
Issue with StringTie
|
|
4
|
1969
|
November 8, 2023
|
|
StringTie producing empty column for gene and transcript counts
|
|
8
|
685
|
November 6, 2023
|
|
Request for megablast tool
|
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3
|
312
|
November 3, 2023
|
|
Smart-seq2 data analysis
|
|
2
|
820
|
November 2, 2023
|
|
RNA-Seq analysis in Galaxy
|
|
11
|
950
|
October 25, 2023
|