|
compare Galaxy europe aligners (bowtie2, BWA and minimap2) and CLC genomics workbench
|
|
11
|
437
|
September 27, 2023
|
|
mm10 version rna star
|
|
1
|
199
|
September 21, 2023
|
|
Troubleshooting BWA-MEM2 resources under Docker Galaxy
|
|
1
|
261
|
September 20, 2023
|
|
Fastp not running: Confirmed job delays at UseGalaxy.org 09/23/2022. Solution: allow queued jobs to process
|
|
10
|
707
|
September 18, 2023
|
|
Troubleshooting MiModD
|
|
3
|
187
|
September 12, 2023
|
|
MimodD extract variant sites
|
|
5
|
566
|
September 11, 2023
|
|
Assembly statistics in reference based RNA seq analysis_tools
|
|
1
|
166
|
September 6, 2023
|
|
trinity from HISAT2 unaligned reads
|
|
4
|
197
|
September 6, 2023
|
|
annotateMyIDs (Galaxy Version 3.17.0+galaxy1) not working
|
|
2
|
219
|
August 31, 2023
|
|
Error mapping short reads with BWA
|
|
6
|
300
|
August 30, 2023
|
|
Planemo test with containerized tools
|
|
1
|
169
|
August 23, 2023
|
|
Infer Experiment results - Unstranded or Stranded (Reverse)?
|
|
1
|
217
|
August 17, 2023
|
|
Same error time and again
|
|
6
|
541
|
August 11, 2023
|
|
Unclear Bowtie2 unaligned read filenames
|
|
5
|
804
|
August 11, 2023
|
|
how to get the MadLandDB mentioned in this tutorial?
|
|
2
|
212
|
July 31, 2023
|
|
problem with sh run_tests.sh -integration --debu
|
|
3
|
299
|
July 21, 2023
|
|
SAM BAM conversion and sort order
|
|
3
|
360
|
July 20, 2023
|
|
CHM13 T2T genome not found in options for some tools
|
|
10
|
654
|
July 20, 2023
|
|
HISAT2 error failed to read header from "-"
|
|
5
|
623
|
December 21, 2023
|
|
BWA-MEM2 Built in Genome Indexes is not working.
|
|
2
|
213
|
December 21, 2023
|
|
Sus Scrofa 11.1 reference genome in Freebayes
|
|
1
|
285
|
June 27, 2023
|
|
HISAT2 reporting an error on hg19 full genome. Local install
|
|
24
|
641
|
December 20, 2023
|
|
MethylDackel, GTN Tutorial Galaxies, and DNA Methylation
|
|
9
|
808
|
June 20, 2023
|
|
Metilene tool usage
|
|
7
|
786
|
June 20, 2023
|
|
Change name of dataset in collection
|
|
2
|
299
|
June 16, 2023
|
|
missing reference genome (Aedes aegypti AaegL5.0)
|
|
5
|
271
|
June 13, 2023
|
|
Can use BWA-MEM to concatenated files
|
|
2
|
659
|
December 20, 2023
|
|
GO and KEGG analysis
|
|
3
|
693
|
March 22, 2023
|
|
Trimmomatic and bwa-mem
|
|
3
|
463
|
May 1, 2023
|
|
Alignment time in galaxy
|
|
1
|
272
|
May 1, 2023
|