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Multiple files after demultiplexing using radtags - what files do I use for mapping/SNP calling etc.,?
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1
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133
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June 6, 2024
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Bowtie2: how to normalize reads by spike in
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1
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119
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May 24, 2024
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RNA STAR length of the genomic sequence around annotated junctions
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2
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107
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May 2, 2024
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Blastn issue; what is the alternative tool?
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4
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205
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April 25, 2024
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NCBI BLAST+ rpstblastn
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2
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126
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April 25, 2024
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Bowtie2 and BWA aligners
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7
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352
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March 22, 2024
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Too many duplicated sequences OR unassigned because of mapping quality
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2
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1386
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March 20, 2024
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HISAT2 crash/failure
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7
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1370
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March 20, 2024
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HISAT2 job killed due to not enough memory allocated for the job
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5
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482
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March 19, 2024
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Diamond troubleshooting
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7
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220
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February 9, 2024
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Mapping with STAR Error
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5
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279
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January 26, 2024
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RNA STAR stuck on running
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2
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225
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December 23, 2023
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Je-Demultiplex outputs not working in alignment stage
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1
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295
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December 21, 2023
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Galaxy Docker - Error for all but 2 parallel jobs
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1
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299
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December 21, 2023
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HiSat reference genomce seq.fasta GRCh38 does not work and HiSat2 does not accept other ref.seq.fasta
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1
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456
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December 21, 2023
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Resolved: Tools are missing in my account usegalaxy.org (main server)
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7
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558
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December 15, 2023
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Filter reference/subject sequences based on mapping
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3
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200
|
December 12, 2023
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Time for Running RNA Seq Workflow
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1
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297
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December 1, 2023
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BBtools: BBmap aligned
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2
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192
|
November 30, 2023
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Testing Pulsar (GTN archive 2023-11-01) errors
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1
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219
|
November 29, 2023
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There are no locally cached or built-in genomes on use.galaxy.org
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1
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246
|
November 29, 2023
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why does computematrix programe run so long?
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4
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308
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November 16, 2023
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Issue with StringTie
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5
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1861
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December 20, 2023
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StringTie producing empty column for gene and transcript counts
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9
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441
|
December 21, 2023
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Request for megablast tool
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3
|
256
|
November 3, 2023
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Smart-seq2 data analysis
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2
|
585
|
November 2, 2023
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RNA-Seq analysis in Galaxy
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12
|
714
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December 21, 2023
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DeepTools: bamCoverage output doesn't match manual counts
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6
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332
|
October 19, 2023
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Error of Deseq2
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1
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379
|
October 16, 2023
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Usage help -- single end versus paired end BAM options
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5
|
608
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November 10, 2023
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