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Genes from my reference genome are not annotated in output files. Trying to get read count per gene/abundant gene list
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1
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51
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October 1, 2024
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Train Augustus doesn't work
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7
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310
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September 10, 2024
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What is the meaning of Reference Gene Model in FPKM Tools in Galaxy?
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1
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176
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August 6, 2024
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Human genome GCF_000001405 and variations
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1
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318
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July 24, 2024
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Generating a New GFF file from a previously merged Stringtie File
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1
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88
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July 5, 2024
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Where to get human reference annotation in gff3 or gtf format?
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2
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483
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June 27, 2024
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Obtain annotation file for mouse genome for ATAC-seq
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1
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141
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June 6, 2024
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RNA Star: Can I generate a temporary index with files from previous assemblies?
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2
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206
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May 13, 2024
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RNA STAR quantimode count difference between run on galaxy and on self linux server
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4
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145
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May 7, 2024
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Error Using human hg38 in Reference-based RNA-Seq data analysis
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2
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357
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April 29, 2024
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about tutorial files and their sources
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8
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300
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April 26, 2024
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Adding genome reference?
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2
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260
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April 23, 2024
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sRNAPipe query for input fasta files
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1
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166
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March 28, 2024
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Mstrg convertion into gene symbol. Is this possible?
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1
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472
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March 5, 2024
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hg38 patch 11 fa.gz error
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1
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296
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January 31, 2024
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UCSC main table browser regarding
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1
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134
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January 30, 2024
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How to use a gtf file from ensemble?
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1
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261
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January 16, 2024
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Regarding SNP eff
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1
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211
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January 16, 2024
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Reference transcriptome
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3
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168
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January 16, 2024
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Map reads to KEGG/GO/funct.profile
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2
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197
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January 9, 2024
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Glimmer3 results failed to convert to GFF3 - claiming a Metadata Error
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0
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578
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August 23, 2021
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create gff file with eggnog_mapper
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0
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486
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January 2, 2023
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Mapping Leishmania transcript using RNA STAR
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1
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276
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December 12, 2023
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Human Reference genome
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2
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304
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November 28, 2023
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.gff3 file not showing in build-index with gene model
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1
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203
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November 27, 2023
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Question about genome-wide alternative splicing analysis own samples
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3
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269
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November 15, 2023
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StringTie producing empty column for gene and transcript counts
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8
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694
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November 6, 2023
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RNA-Seq analysis in Galaxy
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11
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963
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October 25, 2023
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Basic Question - FPKM Count - What do I use as the reference gene model?
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1
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595
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October 19, 2023
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"genomeDir": an invalid option
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3
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334
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October 17, 2023
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