|
In featurecounts I got 69% assigned but count matrix full of zeros
|
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4
|
48
|
November 4, 2021
|
|
Error with MergeSamFiles
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1
|
84
|
September 2, 2021
|
|
Couldn't annotate any gene Name using Annotate DESeq2/DEXSeq output tables
|
|
5
|
168
|
July 31, 2021
|
|
Help adding additional reference genome?
|
|
0
|
138
|
July 26, 2021
|
|
Difference Between using mm10 vs GRCm38 GFF/GTF
|
|
1
|
119
|
July 19, 2021
|
|
Mapping to a uploaded (large) reference genome dataset -- Platform Choices
|
|
14
|
322
|
June 9, 2021
|
|
Download genome into Galaxy
|
|
9
|
1318
|
May 12, 2021
|
|
Fatal error: Exit code 1 () MultiQC and STAR erros
|
|
1
|
257
|
March 3, 2021
|
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hg19 as reference produce bad ordered bams
|
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2
|
121
|
February 22, 2021
|
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Kept seeing "Illegal stran" when using SAM/BAM to count matrix
|
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8
|
219
|
February 12, 2021
|
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How to solve the problem related to unmatched chromosome identifiers?
|
|
1
|
133
|
January 4, 2021
|
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Genome of interest not listed for using HISAT2
|
|
7
|
277
|
December 27, 2020
|
|
Genome of interest not listed for using TopHat
|
|
1
|
144
|
December 23, 2020
|
|
Please add the Xenopus laevis reference genome to Galaxy -- Indexing already planned, use a Custom Genome/Build for now
|
|
6
|
319
|
December 18, 2020
|
|
How to bring the reference genome to Usegalaxy
|
|
3
|
186
|
December 14, 2020
|
|
scRNAseq Galaxy workflow
|
|
13
|
852
|
December 11, 2020
|
|
Need help with selecting reference genome in Galaxy installed locally
|
|
2
|
302
|
December 1, 2020
|
|
Uploading A. thaliana reference genome to RNA STAR
|
|
1
|
158
|
November 30, 2020
|
|
RNA Star alignment to opposum monDom5 genome
|
|
1
|
168
|
November 10, 2020
|
|
FeatureCounts No Features
|
|
3
|
381
|
November 10, 2020
|
|
Baboon reference genome
|
|
2
|
147
|
October 30, 2020
|
|
Request for including 2x fungal genomes in the GALAXY reference genome list
|
|
2
|
216
|
October 29, 2020
|
|
Error in Freebayes
|
|
4
|
409
|
October 19, 2020
|
|
getSpliced() error: improper genomic coordinate 46954453 on chrUn_random for TCONS_00084296
|
|
2
|
470
|
June 18, 2020
|
|
Include to the available genomes the Aspergillus nidulans genome
|
|
0
|
144
|
June 8, 2020
|
|
Filter SAM or BAM, output SAM or BAM files
|
|
1
|
386
|
May 26, 2020
|
|
RNA STAR not allowing genome index choice
|
|
1
|
339
|
April 13, 2020
|
|
Samtools merge error
|
|
3
|
833
|
March 16, 2020
|
|
danRer11 - actually genome data missing
|
|
2
|
236
|
January 27, 2020
|
|
Reference Genome in some tools - Fully indexing genomes with Data Managers
|
|
3
|
564
|
January 27, 2020
|
