mapping file - DESeq2 error
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2
|
366
|
September 16, 2022
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Implementing a command line tool with input and output folders as a Galaxy tool
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1
|
464
|
July 5, 2022
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salmonKallistoMtxTo10x not working
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3
|
450
|
May 11, 2022
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DESEQ2 error with filtered salmon-quant input
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0
|
578
|
May 11, 2022
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Does running Salmon in Galaxy output a mapping rate?
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4
|
766
|
March 31, 2022
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Calculating TPM from HISAT2 (bam) files
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3
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1541
|
March 7, 2022
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Salmon output with transcript IDs
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9
|
1872
|
December 21, 2023
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Tximport in usegalaxy
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3
|
465
|
October 13, 2022
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salmon quantmerge giving fewer rows than expected
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0
|
404
|
December 1, 2021
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Salmon quantification using Ensembl references
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4
|
1046
|
October 21, 2021
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generate count matrix from salmon output in galaxy
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1
|
587
|
October 8, 2021
|
Salmon: Index file and mapping of transcripts to genes
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|
1
|
719
|
August 29, 2021
|
DESEQ2 results file empty (Galaxy)
|
|
7
|
845
|
August 9, 2021
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Some tools can not be found by learning "Generating a single cell matrix using Alevin By: Wendi Bacon Jonathan Manning"
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0
|
281
|
August 2, 2021
|
How to use the TPM data from either Stringtie or Sailfish or Killisto quant
|
|
7
|
1159
|
June 16, 2021
|
Unassigned Multimapping in featurecounts
|
|
9
|
9788
|
June 15, 2021
|
Salmon Quantmerge
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|
1
|
930
|
May 21, 2021
|
What file to use for Deseq2 and where to get it from
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|
3
|
666
|
March 19, 2021
|
errors when running Salmon data manager
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|
0
|
625
|
March 18, 2021
|
Salmon Auxiliary files - mapping stats
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|
1
|
412
|
March 4, 2021
|
Salmon quant to DESeq2
|
|
0
|
471
|
November 12, 2020
|
DEseq2 Error in read.table
|
|
4
|
980
|
October 26, 2020
|
HISAT2 runs successfully with 76% alignment reported but empty BAM file (71 bytes)
|
|
8
|
1161
|
July 28, 2020
|
Salmon - Update request
|
|
3
|
835
|
June 29, 2020
|
Trinity align reads and estimate abundance Fatal Error
|
|
6
|
2065
|
December 21, 2023
|
What are the RNA-seq data processing steps in Galaxy according to de novo approach?
|
|
1
|
981
|
June 19, 2020
|
Question with Salmon quant and tximport
|
|
0
|
610
|
April 16, 2020
|
BAM files error with Salmon quant
|
|
1
|
883
|
April 2, 2020
|
Generate gene to transcript map: WARNING output
|
|
8
|
2346
|
February 29, 2020
|
Cant select the hg.38 genome reference transcriptome when trying to run salmon quant
|
|
0
|
351
|
February 4, 2020
|