scrna-seq

Topic Replies Views Activity
MiGMAP long run time
usegalaxy.eu support
scrna-seq
18 255 October 28, 2021
DESeq2 with single cell data - do cells from same sample get treated independently during analysis?
usegalaxy.eu support
deseq2 ,  scrna-seq
0 133 July 9, 2021
Seurat can not save outputs into rds or Rscript ?
usegalaxy.org support
scrna-seq ,  rscript
10 280 June 11, 2021
Best Galaxy tools/workflow to analyze scRNAseq Series Matrix from NIH GEO?
scrna-seq
3 119 February 9, 2021
scRNAseq Galaxy workflow
custom-genome ,  scrna-seq ,  reference-annotation ,  gtf ,  reference-genome
13 837 December 11, 2020
RNA-Seq for the analysis of ribosomal RNA (rRNA) processing sites
rna-seq ,  scrna-seq ,  rna-star ,  scrna ,  lncrna
6 232 December 7, 2020
DE analysis after StringTie
tutorial ,  stringtie ,  scrna-seq ,  transcriptomics
1 162 December 2, 2020
single cell barcode extraction for STRT-seq
usegalaxy.eu support
scrna-seq ,  scrna
10 404 November 30, 2020
Finding new transcripts in single-cell RNA-Seq datasets
usegalaxy.eu support
tutorial ,  workflow ,  scrna-seq ,  scrna
1 269 May 16, 2020
Analyse loom files from scRNA seq
scrna-seq ,  loom ,  hdf5
2 535 January 24, 2019