Topics tagged server-open-issue

Topic	Replies	Views	Activity
Fatal error in joining two datasets usegalaxy.eu support server-open-issue	5	14	January 7, 2026
Datasets visible in "History size" but not in history usegalaxy.org support server-open-issue	4	13	January 6, 2026
Error when running DEseq2 - use version 2.11.40.8+galaxy0 usegalaxy.org support server-open-issue , deseq2	1	20	December 26, 2025
Map with KMA using the parameter "-t_db" is not clear! usegalaxy.eu support server-open-issue , tool-help , kma_map	11	107	November 6, 2025
Is the intersect tool working ? API error troubleshooting , data-manipulation , server-open-issue	3	31	October 4, 2025
Troubleshooting failed sequence alignment (Sanger) usegalaxy.eu support server-open-issue , qiime_align_seqs , qiime	4	16	October 3, 2025
Tcode (and other emboss programs) usegalaxy.eu support tool-dev , server-open-issue , tool-help , emboss	9	104	September 29, 2025
MrBayes - no output files found usegalaxy.eu support server-open-issue , tool-help , mrbayes	2	46	September 26, 2025
Repeatexplorer fails on single end input usegalaxy.eu support server-open-issue	13	95	September 25, 2025
Multiple Sequence Alignment is not interactive usegalaxy.eu support troubleshooting , server-open-issue , visualization	2	39	September 2, 2025
NCBI FCS GX fails (but used to run) usegalaxy.org support server-open-issue , ncbi_fcs_gx	4	109	August 6, 2025
Interactive BlobToolKit server-open-issue , tool-help , blobtoolkit , interactive_tool_blobtoolkit	4	72	July 14, 2025
Apollo Create or Update Organism error usegalaxy.eu support server-open-issue , tool-help , apollo	4	84	July 8, 2025
Cannot Preview BAM File on usegalaxy.org – "Unknown or invalid visualization: igv" usegalaxy.org support server-open-issue	6	132	June 12, 2025
Cannot "export history to file" usegalaxy.org support history-transfer , troubleshooting , server-open-issue	12	96	April 3, 2025
Unsharing shared histories usegalaxy.org support share-or-publish , server-open-issue	4	50	March 31, 2025
Gemini database installation crash server-admin , galaxy-local , troubleshooting , server-open-issue	6	51	March 17, 2025
troubles with footprinting tool usegalaxy.eu support server-open-issue , tool-help , footprint	6	59	February 19, 2025
featureCounts Fatal error: Exit code 127 () server-open-issue , featurecounts	6	123	January 8, 2025
PhyloseqR not showed up, not working server-open-issue , tool-help , interactive_tool_phyloseq , microgalaxy	13	134	November 19, 2024
problem with funannotate usegalaxy.eu support reference-index , server-open-issue , funannotate	3	704	June 1, 2023
EMBOSS program no graphic output usegalaxy.org support server-open-issue , emboss	4	42	September 24, 2025
StringeTie Generating Empty Transcript and Gene Counts usegalaxy.org support server-open-issue , stringtie	17	286	September 20, 2024
Updates for Kraken2 databases: Viruses and others reference-index , metagenomics , server-open-issue , kraken2	1	173	September 9, 2024
Map With BWA-MEM not working with one particular reference genome usegalaxy.org support reference-index , server-open-issue	5	227	August 30, 2024
psortb error on usegalaxy.eu usegalaxy.eu support troubleshooting , server-open-issue	10	184	August 2, 2024
Kraken2 databases mixed up reference-index , server-open-issue	16	712	June 24, 2024
bbtools:bbduk memory issue metagenomics , server-open-issue , exceeds-memory-error	4	259	May 23, 2024
Tutorial issues - De novo transcriptome assembly, annotation, and differential expression analysis. usegalaxy.eu support server-open-issue	3	165	April 19, 2024
Error using tool "Download and Extract Reads in FASTQ format from NCBI SRA" usegalaxy.org support ncbi , sra , server-open-issue	1	172	April 11, 2024