Topics tagged server-open-issue

Topic	Replies	Views	Activity
NCBI FCS GX fails (but used to run) usegalaxy.org support server-open-issue , ncbi_fcs_gx	4	54	August 6, 2025
Interactive BlobToolKit server-open-issue , tool-help , blobtoolkit , interactive_tool_blobtoolkit	4	29	July 14, 2025
Apollo Create or Update Organism error usegalaxy.eu support server-open-issue , tool-help , apollo	4	49	July 8, 2025
Cannot Preview BAM File on usegalaxy.org – "Unknown or invalid visualization: igv" usegalaxy.org support server-open-issue	6	77	June 12, 2025
Cannot "export history to file" usegalaxy.org support history-transfer , troubleshooting , server-open-issue	12	37	April 3, 2025
Unsharing shared histories usegalaxy.org support share-or-publish , server-open-issue	4	15	March 31, 2025
Gemini database installation crash server-admin , galaxy-local , troubleshooting , server-open-issue	6	26	March 17, 2025
troubles with footprinting tool usegalaxy.eu support server-open-issue , tool-help , footprint	6	21	February 19, 2025
featureCounts Fatal error: Exit code 127 () server-open-issue , featurecounts	6	61	January 8, 2025
PhyloseqR not showed up, not working server-open-issue , tool-help , interactive_tool_phyloseq	13	73	November 19, 2024
problem with funannotate usegalaxy.eu support reference-index , server-open-issue , funannotate	3	666	June 1, 2023
EMBOSS program no graphic output usegalaxy.org support server-open-issue , emboss	2	19	September 25, 2024
StringeTie Generating Empty Transcript and Gene Counts usegalaxy.org support server-open-issue , stringtie	17	163	September 20, 2024
Updates for Kraken2 databases: Viruses and others reference-index , metagenomics , server-open-issue , kraken2	1	121	September 9, 2024
Map With BWA-MEM not working with one particular reference genome usegalaxy.org support reference-index , server-open-issue	5	146	August 30, 2024
psortb error on usegalaxy.eu usegalaxy.eu support troubleshooting , server-open-issue	10	135	August 2, 2024
Kraken2 databases mixed up reference-index , server-open-issue	16	613	June 24, 2024
bbtools:bbduk memory issue metagenomics , server-open-issue , exceeds-memory-error	4	202	May 23, 2024
Tutorial issues - De novo transcriptome assembly, annotation, and differential expression analysis. usegalaxy.eu support server-open-issue	3	130	April 19, 2024
Error using tool "Download and Extract Reads in FASTQ format from NCBI SRA" usegalaxy.org support ncbi , sra , server-open-issue	1	147	April 11, 2024
Dataset temporarily displaying as deleted - preventing job from running usegalaxy.org support troubleshooting , server-open-issue	8	155	March 14, 2024
RStudio 404 Error: February 2024 ~~Pending correction~~ Fixed! usegalaxy.org support troubleshooting , server-open-issue	3	296	September 17, 2024
recetox-msfinder not working on usegalaxy.eu usegalaxy.eu support metabolomics , server-open-issue	2	130	February 1, 2024
Request: kraken2 DB update usegalaxy.eu support reference-index , server-open-issue	0	141	December 26, 2023
bowtie2 not available while running MetaPhlan2 and Humann2 usegalaxy.org support metagenomics , server-open-issue	1	276	January 10, 2024
Error in Locally Cached for MetaPhlAn2 and HUMAnN2 usegalaxy.be support server-open-issue	2	367	December 6, 2023
CSVLogger (callback) with Create deep learning model usegalaxy.eu support server-open-issue , machine-learning	7	338	September 20, 2023
MimodD extract variant sites usegalaxy.org support mapping , server-open-issue	5	715	September 11, 2023
Error with de novo assembly using Trintiy usegalaxy.org support assembly , transcriptomics , server-open-issue , rna-seq	4	396	August 18, 2023
Trinity error /cvmfs: No such file or directory usegalaxy.org support transcriptomics , server-open-issue , rna-seq	9	466	July 6, 2023