|
Assembly statistics in reference based RNA seq analysis_tools
|
|
1
|
272
|
September 6, 2023
|
|
Fatal error: Exit code 1 () on StringTie De Novo
|
|
3
|
59
|
September 28, 2024
|
|
StringTie gene count files have different row numbers
|
|
12
|
186
|
July 22, 2025
|
|
StringeTie Generating Empty Transcript and Gene Counts
|
|
17
|
251
|
September 20, 2024
|
|
Error in reference genome file format - STRINGTIE
|
|
1
|
171
|
May 28, 2024
|
|
Stringtie invalid escape sequence
|
|
2
|
544
|
May 16, 2024
|
|
StringTie error generating gene and transcripts counts files
|
|
3
|
359
|
July 22, 2025
|
|
Issue with StringTie Output File when using DESeq2 option
|
|
5
|
621
|
July 22, 2025
|
|
Error in stringtie-Metadata generation failed
|
|
1
|
239
|
May 6, 2024
|
|
Mstrg convertion into gene symbol. Is this possible?
|
|
2
|
435
|
July 22, 2025
|
|
Stringtie Tool Unavailable
|
|
4
|
351
|
December 15, 2023
|
|
Time for Running RNA Seq Workflow
|
|
1
|
310
|
December 1, 2023
|
|
Issue with StringTie
|
|
5
|
1910
|
December 20, 2023
|
|
StringTie producing empty column for gene and transcript counts
|
|
9
|
571
|
December 21, 2023
|
|
Error of Deseq2
|
|
1
|
406
|
October 16, 2023
|
|
converting GFF to GTF
|
|
6
|
1009
|
December 21, 2023
|
|
"error in importRdata" using isoformswitchanalyzR
|
|
14
|
642
|
September 12, 2023
|
|
DESeq2 with pair end file (Stringtie)
|
|
1
|
228
|
September 5, 2023
|
|
IsoformSwitchAnalyzR - "longer object length is not a multiple of shorter object length"
|
|
2
|
564
|
July 4, 2023
|
|
Annotate DESeq2/DEXSeq output
|
|
2
|
319
|
July 22, 2025
|
|
Featurecounts & Strandedness
|
|
1
|
682
|
May 1, 2023
|
|
Error in Stringtie Results
|
|
3
|
923
|
December 21, 2023
|
|
StringTie counts showed 0 result
|
|
1
|
420
|
March 21, 2023
|
|
stringtie file not showing results
|
|
1
|
175
|
February 26, 2023
|
|
Stringtie not outputting counts anymore
|
|
4
|
728
|
July 22, 2025
|
|
Error STAR .bam to StringTie DESeq2/Limma-voom
|
|
4
|
508
|
December 21, 2023
|
|
Deseq2 error after stringTie gene count are given as input
|
|
6
|
664
|
December 20, 2023
|
|
Local Installation Performance
|
|
4
|
366
|
October 11, 2022
|
|
Error when attempting stringtie assembly: no reference transcripts found. Using WBcel235 from NCBI
|
|
2
|
707
|
December 21, 2023
|
|
Use blastx on Galaxy
|
|
10
|
1261
|
September 21, 2022
|