|
Gene count file was empty after Stringtie
|
|
2
|
680
|
September 17, 2022
|
|
Request to add Sus Scrofa species compatability with AnnotatemyIDs and EGSEA
|
|
2
|
602
|
December 21, 2023
|
|
problem facing in StringTie
|
|
2
|
441
|
December 21, 2023
|
|
Proteogenomics help needed: How to get genomic coordinates of identified proteins?
|
|
0
|
454
|
May 11, 2022
|
|
Failed to activate conda environment! - Mapping step
|
|
5
|
1256
|
December 20, 2023
|
|
RNA STAR not running!
|
|
3
|
702
|
March 22, 2022
|
|
Calculating TPM from HISAT2 (bam) files
|
|
3
|
1731
|
March 7, 2022
|
|
Stringtie merge error
|
|
11
|
2242
|
December 21, 2023
|
|
Downstream jobs finishing first
|
|
3
|
478
|
February 8, 2022
|
|
Stringtie not running
|
|
3
|
514
|
February 8, 2022
|
|
Unable to get results in DESeq2
|
|
1
|
401
|
January 25, 2022
|
|
Error with StringTie: exi code 127
|
|
3
|
661
|
January 3, 2022
|
|
Merge specific columns from several files in one file
|
|
1
|
586
|
November 2, 2021
|
|
Troubleshooting problems with DESeq2
|
|
9
|
1313
|
July 22, 2025
|
|
DEseq2 error with different numbers of rows
|
|
13
|
2882
|
December 21, 2023
|
|
Still need to remove @ from paths in perl script?
|
|
8
|
1275
|
December 21, 2023
|
|
How to use the TPM data from either Stringtie or Sailfish or Killisto quant
|
|
7
|
1319
|
June 16, 2021
|
|
DEseq2 error; Job output not returned from cluster
|
|
6
|
884
|
July 22, 2025
|
|
Getting transcript abundace from StringTie merge gtf files
|
|
2
|
592
|
April 16, 2021
|
|
Not able to run Deseq 2
|
|
1
|
406
|
March 19, 2021
|
|
Error while running the transcript count file obtained using StringTie on DeSeq
|
|
4
|
855
|
March 9, 2021
|
|
Tool to use in place of Cuffdiff
|
|
15
|
1153
|
January 25, 2021
|
|
"Local Data" Generic Input tool
|
|
3
|
593
|
January 7, 2021
|
|
DE analysis after StringTie
|
|
1
|
932
|
December 2, 2020
|
|
clustering of unigenes from stringtie assembly
|
|
0
|
316
|
November 27, 2020
|
|
StringTie error (An error occured with this dataset)
|
|
1
|
573
|
November 26, 2020
|
|
To convert String tie GTF file to FASTA file
|
|
1
|
2309
|
November 20, 2020
|
|
BWA-MEM Index can't be found -- Resolved
|
|
8
|
2423
|
October 1, 2020
|