|
snippy tool update request
|
|
3
|
75
|
July 9, 2021
|
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Cuffdiff bam sort error
|
|
1
|
69
|
April 13, 2021
|
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Unable to run Unicycler or ABySS
|
|
2
|
152
|
January 13, 2021
|
|
ABySS fungal de novo genome assembly: Update, ABySS removed from usegalaxy.org, alternative usegalaxy.eu
|
|
1
|
293
|
January 13, 2021
|
|
Galaxy error using Velveth error -- Deprecated tool suite: try SPAdes instead
|
|
1
|
137
|
December 21, 2020
|
|
getSpliced() error: improper genomic coordinate 46954453 on chrUn_random for TCONS_00084296
|
|
2
|
340
|
June 18, 2020
|
|
Cuffmerge error: duplicate/invalid 'transcript' feature ID=Ma03_t01040.3
|
|
3
|
321
|
June 18, 2020
|
|
HISAT2 and job stages, resources, PLAZA genomes, avoiding deprecated tools
|
|
1
|
148
|
May 19, 2020
|
|
Data paused and keep getting error: Tophat RNA data -- Tophat/Tophat2 Deprecated, use HISAT2
|
|
1
|
190
|
May 8, 2020
|
|
i got this error when i wanted to Evaluate the depth of coverage of the aligned region -- ALL GATK 1.4 tools are deprecated and should be avoided.
|
|
5
|
286
|
April 23, 2020
|
|
Error message when running 'Convert' tool under 'Genome Diversity' option -- All Genome Diversity tools are now deprecated and should be avoided
|
|
3
|
194
|
April 22, 2020
|
|
Tophat not working??? - Deprecated tool, use HISAT2 instead
|
|
6
|
345
|
February 29, 2020
|
|
Cuffdiff--SQLite option is buggy for all versions or just for the latest one?!
|
|
3
|
211
|
February 29, 2020
|
|
Cuff Suite Not Running -- Deprecated Tool Suite
|
|
1
|
265
|
October 17, 2019
|
|
Galaxy GATK tool
|
|
1
|
533
|
October 4, 2019
|
|
Unexpected failure when I perform cufflinks: Deprecated tool. Solution: Use current Differential Expression Tools, Workflows, Tutorials, FAQs
|
|
2
|
426
|
August 31, 2019
|
|
Tophat error for paired data analysis (deprecated tool)
|
|
1
|
360
|
April 19, 2019
|
|
Having issue with exome sequencing - Deprecated tool (BWA for Illumina) in older workflow
|
|
3
|
559
|
February 11, 2019
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