Topics tagged tool-help

Topic	Replies	Views	Activity
BWA MEM2 too slow server-admin , workflow , galaxy-local , tool-help , variant-analysis	1	5	March 27, 2025
How to map a collection of individual samples against a custom reference genome with RNA STAR usegalaxy.eu support troubleshooting , tool-help	0	4	March 26, 2025
BBTools: BBNorm usegalaxy.eu support tool-help	0	4	March 25, 2025
Fastp - Collection usegalaxy.eu support tool-help , fastp	0	5	March 25, 2025
Apollo help for Create or Update Organism account , tool-help , apollo	1	4	March 17, 2025
galaxy training - Calling variants in diploid systems gemini annotation source unavailable usegalaxy.be support gemini , tool-help , variant-analysis	8	33	March 15, 2025
Case-sensitive Select tool? usegalaxy.eu support text-manipulation , tool-help , grep1 , select	3	7	March 13, 2025
Snpeff database run errors usegalaxy.org support tool-help , snpeff , snpeff_build_gb	3	12	March 13, 2025
How to solve problems in edgeR? usegalaxy.eu support text-manipulation , troubleshooting , resources , tool-help , edger	2	22	March 13, 2025
duplicates in MAGeCKs test tool-help , crispr , mageck_test , mageck_count	5	7	March 12, 2025
Resolving memory failures with SPAdes usegalaxy.eu support spades , exceeds-memory-error , resources , tool-help	2	26	March 17, 2025
Filtering by region using a list of contigs usegalaxy.org support tool-help , bcftools_filter	3	11	March 5, 2025
CREx Matrix has Different Values usegalaxy.eu support tool-help , revoluzer_crex	5	22	March 5, 2025
Trim - Cannot trim to large positions tool-help	1	6	March 4, 2025
running BWA MEM2 on ONT fastq file: https://usegalaxy.eu/jobs/submission/success usegalaxy.eu support tool-help	1	8	February 28, 2025
This is regarding PCA using Bio3D tool-help , bio3d_pca	1	6	February 26, 2025
Is my job still running? usegalaxy.org support queued-gray-datasets , tool-help , align_families	3	38	February 25, 2025
NCBI BLAST+ blastn tool-help , ncbi_blastn_wrapper	3	14	February 25, 2025
Samtools mpileup usegalaxy.org support tool-help	1	5	February 24, 2025
blobtoolkit; error in the snail plot usegalaxy.eu support tool-help , blobtoolkit	1	15	February 20, 2025
MOB-Typer unstable results usegalaxy.eu support tool-help	13	36	February 20, 2025
Metaphlan SGB to GTDB followup tool-help , microgalaxy , gtdb_to_taxdump	1	27	February 19, 2025
troubles with footprinting tool usegalaxy.eu support server-open-issue , tool-help , footprint	6	21	February 19, 2025
How should I prepare the correct input file to run CEMiTool without bug? usegalaxy.org support troubleshooting , tool-help , cemitool	1	8	February 19, 2025
AquaINFRA OGC API Processes usegalaxy.eu support tool-help	1	5	February 19, 2025
GTDB-Tk Classify genomes reference-index , metagenomics , tool-help , gtdbtk_classify_wf , microgalaxy , evolution	3	204	February 14, 2025
An error with Batch_correction tool (for metabolomics data analysis) usegalaxy.org.au support tool-help	6	13	February 14, 2025
DESeq2 output file column heading missing tool-help , deseq2	1	8	February 14, 2025
Having issues with my file formats, can't find "Check Format" section usegalaxy.eu support text-manipulation , metabolomics , tool-help	9	18	February 12, 2025
Error in running Spades assembly usegalaxy.eu support assembly , spades , tool-help	4	50	February 11, 2025