Topics tagged troubleshooting

Topic	Replies	Views	Activity
Troubleshooting resources for errors or unexpected results share-or-publish , troubleshooting , queued-gray-datasets , resources How to troubleshoot your work in Galaxy, and how to ask for help! :mag_right: Review your Job Details → inputs + parameters + logs using the i-icon inside of any dataset. :mortar_board: Learn with a tutorial and custom…	5	10511	April 17, 2024
Merge Kraken2 & Bowtie2 classified reads usegalaxy.org support text-manipulation , troubleshooting	1	2	December 21, 2024
Active (green) History dataset: unable to use as input as tools say it was deleted usegalaxy.org support troubleshooting , storage-dashboard , resources	3	5	December 17, 2024
Error in running BiGSCAPE troubleshooting , bigscape	7	15	December 14, 2024
Converting bedgraph to bigwig, product files 0 bytes usegalaxy.org support troubleshooting , tool-help , ucsc_wigtobigwig	7	28	December 12, 2024
New files not uploading usegalaxy.org support upload , troubleshooting , server-status	3	26	December 12, 2024
Time consuming for InterProScan output usegalaxy.eu support troubleshooting	3	17	December 10, 2024
fatal: detected dubious ownership in repository at '/opt/repex_tarean' galaxy-local , troubleshooting	1	8	December 3, 2024
Fastq file not uploading usegalaxy.eu support troubleshooting	6	31	November 26, 2024
data not uploading usegalaxy.eu support troubleshooting	7	34	November 25, 2024
Fetal error:Exit code 1 () while running blockclust usegalaxy.org support troubleshooting	1	11	November 23, 2024
false positives and negatives when long reads corrected using short reads usegalaxy.eu support troubleshooting , variant-analysis	2	9	November 20, 2024
setup local server (on MacOS); No module named 'boltons' galaxy-local , troubleshooting	3	18	November 19, 2024
Adding Galaxy EU workflow to IWC Library - Planemo installation usegalaxy.eu support workflow , troubleshooting	7	37	November 19, 2024
qiime2 feature-classifier classify-consensus-blast usegalaxy.org support troubleshooting , qiime2	1	13	November 15, 2024
Trouble whith demultiplexing tool of FROGS 4.1 troubleshooting , usegalaxyfr	2	10	November 15, 2024
ATAC-seq Analysis Using MACS2 Callpeak usegalaxy.org support troubleshooting	2	9	November 13, 2024
Exploring Mothur hits to a SILVA database reference-index , troubleshooting , mothur	1	13	November 11, 2024
Troubleshooting MadLandDB gtn-tutorial , troubleshooting	1	1	November 11, 2024
Interproscan format issues usegalaxy.eu support troubleshooting , mapping , tool-help	3	21	November 7, 2024
Trim and split Nanopore data set to input in Krona Pie Crat usegalaxy.org support troubleshooting	3	22	November 7, 2024
I cant visualise any data on my SNPs table troubleshooting , variant-analysis , snippy	2	12	November 7, 2024
Cannot get QIIME2 artifact to work usegalaxy.eu support troubleshooting , tool-help , qiime2 , qiime2_core__tools__import	5	37	November 7, 2024
Faster download FASTQ from NCBI SRA_ERROR usegalaxy.org support upload , troubleshooting , transcriptomics	3	18	November 6, 2024
Very few genes in htseqCount-/FeatureCounts-Output usegalaxy.eu support troubleshooting , htseq-count	8	1808	November 6, 2024
How to find Adapter sequence for trimming troubleshooting , fastqc , geo	1	36	October 31, 2024
Freebayes stopped working in exome analysis usegalaxy.org support troubleshooting	4	16	October 30, 2024
Mutect2 error - please advise usegalaxy.eu support troubleshooting	5	20	October 29, 2024
ABRicate search troubleshooting	1	11	October 21, 2024
Error running limma "non-unique row names" troubleshooting , limma_voom	3	21	October 21, 2024

Troubleshooting resources for errors or unexpected results

How to troubleshoot your work in Galaxy, and how to ask for help! :mag_right: Review your Job Details → inputs + parameters + logs using the i-icon inside of any dataset. :mortar_board: Learn with a tutorial and custom…