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Error while wieving .vcf file on IGV
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0
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91
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August 4, 2021
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How to filter FreeBayes output (vcf) file to specific region (SNP) bed file in usegalaxy
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1
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188
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February 4, 2021
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Compare variants between RNA-seq libraries
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1
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157
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February 2, 2021
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Annotating variants from VCF (to later get variants per gene) without gtf/gff
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1
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122
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January 17, 2021
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Determining the haplotype
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2
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147
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November 27, 2020
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How to restrict VCF variants using a gene list with the set function in SnpSift?
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2
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161
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November 25, 2020
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vcfvcfintersect does not work on Galaxy installed on MacOS Catalina
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2
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181
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September 21, 2020
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hg38 for Gemini vcf database?
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1
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406
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August 13, 2020
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How to combine 2 VCF files in a Workflow...
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11
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1126
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August 1, 2020
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Merging VCF files
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1
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209
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July 26, 2020
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Help with bcftools isec
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0
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412
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May 5, 2020
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How to add Triticum aestivum snpEff4.3 genome database or appropriate wheat genome database in Galaxy for VCF annotation?
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10
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1024
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March 30, 2020
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Annotate VCF with gene names
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3
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1609
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March 12, 2020
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download gnomad vcf.bgz.tbi dataset into galaxy
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9
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846
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January 29, 2020
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SnpEff annotation- transcript information discordant to the information available on the Ensemble website
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11
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2072
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January 29, 2020
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download gnomad vcf.bgz.tbi dataset into galaxy for gemini annotate and/or join functions
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2
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317
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January 23, 2020
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ANNOVAR annotation error
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1
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473
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January 1, 2020
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Getting insertion/deletion count from VCF file
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0
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389
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December 8, 2019
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Data privacy and VCF modification before upload
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1
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242
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November 20, 2019
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Snpeff eff annotate Info field ends in the next vcf line
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3
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308
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November 17, 2019
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Missing information VCFtoTab-delimited
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16
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1031
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November 15, 2019
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Remove some vcf header lines (not all)
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2
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882
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November 15, 2019
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vcf2tsv docker vs. usegalaxy.eu
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1
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285
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November 14, 2019
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Delete lines from vcf with ALT="."
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5
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460
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November 6, 2019
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bcftools query - How to handle information with same INTO Tag
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1
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555
|
October 31, 2019
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Upload data size limits and vcf datasets in a docker Galaxy
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3
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353
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October 23, 2019
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BCFtools Mpileup Qual=0
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6
|
989
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August 20, 2019
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How/ where can I download Annotation exac03(hg19) database and import it to Galaxy?
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1
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496
|
July 12, 2019
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Extra line of information generated by VCFtoTab-delimited
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6
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550
|
July 11, 2019
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Comments on displaying VCF and GTF with IGV from Galaxy
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5
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815
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June 24, 2019
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