submitting a job to a SGE 8.1.9 Cluster from an application called galaxy logged the following error: galaxy.jobs.runners.drmaa WARNING 2019-02-13 13:20:43,111 (427) drmaa.Session.runJob() failed, will retry: code 17: MUNGE authentication failed: Invalid credential format I have verified UIDs and…

Yes, but that’s more complicated than necessary. If you can use qsub on the host where Galaxy runs your best bet is probably to use the command line interface runner with the PBS backend. I’m using this in production (though ssh), this should be a viable option.

drmaa library threads and munge: Invalid Credential Format

jennaj February 21, 2019, 5:11pm 6

linked post/discussion

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drmaa library threads and munge: Invalid Credential Format

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