Troubleshooting resources for errors or unexpected results [usegalaxy.org support] (2)

Start by reviewing the troubleshooting FAQ. Common reasons and solutions for tool errors are explained. Most job errors can be resolved by correcting your input data’s format/content. Others indicate a tool setting/param…

Welcome to Galaxy Community Help [Uncategorized] (2)
Problem with a package instalation [Uncategorized] (7)
RNAseq, reads outside exons [Uncategorized] (3)
multithreading and parallel processing files [Uncategorized] (1)
Per-job conda environment creation errors [Uncategorized] (5)
Delete repository from Tool Shed [Uncategorized] (2)
Workflow extraction issue [usegalaxy.org support] (5)
GalaxyAdmins is returning to a device near you, and we need your ideas [Uncategorized] (1)
Outputs are created, but a final error is stated / Fatal error: [Uncategorized] (6)
How to merge or generate FASTA file with the same chromosome [usegalaxy.org support] (6)
SRA file and run fastq-dump error on local Galaxy [Uncategorized] (5)
Group HTseq counts [Uncategorized] (3)
Adding new tool to a public server [usegalaxy.org support] (2)
Param showing data output from history, but not dataset (ie multiple outputs) nor collections [Uncategorized] (4)
Cloudman AWS "The credentials you have entered are invalid." [Uncategorized] (3)
Question about tool errors in an older Galaxy release [Uncategorized] (3)
RNA seq analysis: deprecated tools, updated tools, learning resources [usegalaxy.org support] (2)
How do you use MultiQC on FastQC files taken from SRA files? [usegalaxy.org support] (2)
transfer history from my account on one Galaxy server to another Galaxy server [usegalaxy.org support] (5)
chimera.vsearch [usegalaxy.org support] (1)
What categories would you like to see at Galaxy Help? [Site Feedback] (8)
Repeat Explorer [Uncategorized] (9)
Old bam files not running in GATK or deeptools after moving files to new server [Uncategorized] (1)
Trackster adding new tracks to visualisation [usegalaxy.org support] (3)
HISAT2 index builder requirements [Uncategorized] (3)
Change pileup to vcf format allowing for great depth (100.000 reads)??? [usegalaxy.org support] (2)
Mpileup with vcf output? How to change galaxy to older version? [usegalaxy.org support] (4)
Problems with the tutorial data [Uncategorized] (5)
Problem adding/checking a docker tool [Uncategorized] (2)