Galaxy Community Help

Topic	Replies	Views	Activity
Troubleshooting resources for errors or unexpected results usegalaxy.org support Check to see if there is a known usegalaxy.* server issue. Server Status: https://status.galaxyproject.org/ If the server was down when you first ran your job, try a rerun once back up. A rerun can also eliminate tra…	1	3080	November 28, 2018
Welcome to Galaxy Community Help	1	1489	November 20, 2018
Error pushing tool to toolshed using planemo tool-dev , planemo , toolshed	7	38	February 25, 2021
fastqc command not found usegalaxy.org support error	12	63	February 24, 2021
What tools should I use for Dual RNA-SEQ? usegalaxy.org support rna-seq	2	125	February 25, 2021
Error when annotating DEX-Seq output with deg_annotate	0	10	February 25, 2021
Trimming before Stacks usegalaxy.eu support	0	11	February 25, 2021
Fatal error: Exit code 1 () MultiQC and STAR erros usegalaxy.org support rna-seq , multiqc , error , rna-star , reference-genome	0	16	February 25, 2021
fastqsanger.gz file not recognized in usegalaxy.org usegalaxy.org support dataset-collection , fastq , ncbi , mapping , fastqsangergz	11	610	February 25, 2021
RepeatExplorer: Identifying satellite families	3	36	February 25, 2021
How to interpret non-grouping datasets in an edgeR MDS plot usegalaxy.org support	1	16	February 25, 2021
Stacks2: process_Radtags won't find paired-end data usegalaxy.eu support	10	38	February 24, 2021
Channel Catfish (Ictalurus punctatus) Genome Addition usegalaxy.org support admin	1	22	February 24, 2021
Proteomics analysis in a mixed plate with TMT16plex usegalaxy.eu support workflow	0	20	February 24, 2021
GTN and Papercuts CoFests this Thursday news , events , cofest , paper-cuts	3	34	February 26, 2021
Interactive Jupyter Notebook doesn't add to my history. usegalaxy.eu support jupyter , gie	3	36	February 23, 2021
Local installation : Integration with Active Directory admin , galaxy-local , error	0	25	February 23, 2021
How to run specific tools on GPU? admin , tutorial , galaxy-local	4	156	February 22, 2021
Problems with Launching Galaxy in AWS usegalaxy.org support cloudman , error	5	56	February 22, 2021
hg19 as reference produce bad ordered bams usegalaxy.org support bam , reference-genome	2	44	February 22, 2021
Unable to finish data import upload	3	54	February 22, 2021
Webinar Series on Galaxy Advanced Features platforms , events , learn , training , public-galaxy-server	0	42	February 22, 2021
Blast2GO Errors usegalaxy.eu support error	2	233	February 22, 2021
problem with goseq and fgsea usegalaxy.eu support	1	42	February 22, 2021
Cuffdiff BAM record error usegalaxy.org support cufflinks , cuffdiff , cuffmerge	1	38	February 22, 2021
GEMINI tool not found in my tool shelf usegalaxy.org support gemini	2	43	February 20, 2021
Delete user account usegalaxy.org support admin	2	36	February 18, 2021
SPAdes, Unicycler, and Trinity have transitioned to run on the new Bridges-2 supercomputer usegalaxy.org support unicycler , trinity , spades	1	40	February 18, 2021
How to input samples for DESEQ2	3	41	February 18, 2021
HISAT2 alignment results in very low in number of mapped reads usegalaxy.org support custom-genome , mapping , qa-qc , hisat2 , reference-annotation	6	78	February 17, 2021

Troubleshooting resources for errors or unexpected results

Check to see if there is a known usegalaxy.* server issue. Server Status: https://status.galaxyproject.org/ If the server was down when you first ran your job, try a rerun once back up. A rerun can also eliminate tra…