| Topic | Replies | Views | Activity | |
|---|---|---|---|---|
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Galaxy Updates Are Underway! Early Nov 2026 at UseGalaxy.org status and job queues
Hi I have been running RNA star for my fastq files, however, its not running, always showing queued. I have used 15% of the shared space from permanent storage. It worked two days ago, but since yesterday its not working… |
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2 | 37 | November 6, 2026 |
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How to see the UseGalaxy.eu job queue statistics
I ran multiple RNA STAR jobs over the weekend and only some managed to be completed, two have been stuck on ‘job currently running’ since friday, and the others have been on queue. Was there a problem in the back end? Ho… |
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2 | 930 | March 5, 2024 |
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FAQ: Create a Qiime2 qza artifact from a Galaxy collection in ONE STEP!
:partying_face: Try the new QZA creation method! Creating a Qiime2 qza artifact :magic_wand: directly from a Galaxy Collection 1. Create your Galaxy Collection! Single end will have the collection shape List Paired end… |
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0 | 197 | February 25, 2026 |
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How to access your Self Serve extended data storage at UseGalaxy servers!
I’m working on a transciptomics data which will probably exceed the given 250GB data. Is there any possible solution to this? for example increasing my storage? |
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1 | 3075 | August 12, 2024 |
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Why collections?
Collections are one of the super-killer features of Galaxy! By Anton Nekrutenko October 21, 2025 |
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0 | 328 | October 21, 2025 |
| GTDB-Tk Classify genomes error type 3 |
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6 | 167 | November 7, 2026 |
| Current implementation of GTDB-Tk Classify genomes is broken (wrong default arguments) |
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2 | 121 | November 7, 2026 |
| "GTDB-Tk database" Galaxy Version 2.6.0+galaxy0 |
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4 | 55 | November 7, 2026 |
| Authentication expired error |
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1 | 12 | November 6, 2026 |
| Request for Bracken 150-bp distribution — PlusPF 2024-01-12 on Galaxy Europe |
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1 | 14 | November 6, 2026 |
| Request for the Chinese hamster genome reference-index |
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2 | 24 | November 5, 2026 |
| Account activation issue on usegalaxy.eu |
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1 | 25 | November 4, 2026 |
| BiG-SCAPE: ask about the Pfam-A.hmm file |
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1 | 18 | November 3, 2026 |
| Mageck MLE runtime and queue |
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3 | 58 | November 3, 2026 |
| Long job scheduling delays on usegalaxy.eu |
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1 | 19 | November 3, 2026 |
| Upload jobs permanently queued on UseGalaxy.eu |
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1 | 21 | November 3, 2026 |
| Restore accidentally deleted UseGalaxy.org account |
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3 | 25 | November 2, 2026 |
| How to access a datasets with bioproject number BioProject PRJNA1096305 |
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1 | 23 | November 2, 2026 |
| DESeq2 Error: “Duplicate 'row.names' Are Not Allowed” When Using miRDeep2 Quantifier Output |
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2 | 49 | October 31, 2026 |
| Repeated Job Pausing and Workflow Interruptions During RNA-seq Analysis |
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2 | 33 | October 30, 2026 |
| Build expression matrix error |
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2 | 37 | October 30, 2026 |
| DESeq2 job remains in “new” state for an extended period |
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1 | 24 | October 30, 2026 |
| DIA-NN input error |
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4 | 61 | October 30, 2026 |
| Generate gene to transcript map |
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1 | 22 | October 30, 2026 |
| BiG-SCAPE on Galaxy Europe: Pfam-A.hmm not found |
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1 | 24 | October 30, 2026 |
| ConFindr doesn't seem to be able to connect with databases |
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1 | 18 | October 30, 2026 |
| Trouble when connecting to FTP server |
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1 | 21 | October 30, 2026 |
| Galaxy Europe – jobs stuck in "new" state |
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3 | 54 | October 30, 2026 |
| GROMACS Energy Minimization job stuck in NEW state |
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1 | 22 | October 30, 2026 |
| Thermo Orbitrap RAW files to mzML for DDA label-free proteomics |
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1 | 25 | October 30, 2026 |