Topic Replies Views Activity
Troubleshooting resources for errors or unexpected results
usegalaxy.org support

Check to see if there is a known usegalaxy.* server issue. Server Status: https://status.galaxyproject.org/ If the server was down when you first ran your job, try a rerun once back up. A rerun can also eliminate tra…

1 4366 November 28, 2018
Welcome to Galaxy Community Help
1 1987 November 20, 2018
Help with error during building an expression matrix
usegalaxy.org support
public-galaxy-server
1 202 November 29, 2021
Fatal error: Exit code 1 () using Shovill
usegalaxy.org support
error
1 155 November 28, 2021
Mothur make.biom tool job submission failed
usegalaxy.org support
tutorial ,  error ,  mothur
0 14 November 27, 2021
Spades genome assembly waiting to run for a long time.
usegalaxy.org support
spades
0 11 November 27, 2021
SQLAlchemy errors preventing installation of tools
admin
0 11 November 26, 2021
Unable to upgrade Galaxy from 16.07
galaxy-local
14 94 November 25, 2021
[Errno 2] No such file or directory, when running galaxy in local
admin ,  galaxy-local ,  error
1 28 November 24, 2021
How to know trinity run status
0 24 November 24, 2021
Extra number in header/top row of HTseq count matrix output
usegalaxy.org.au support
htseq-count
0 24 November 24, 2021
Do spike-In control normalization of RNAseq on Galaxy platform
usegalaxy.org support
workflow
1 265 November 24, 2021
waiting to run trinity
usegalaxy.org support
assembly ,  trinity
0 28 November 24, 2021
Converting command line awk to Galaxy
0 28 November 23, 2021
Unidentified error running goseq
3 60 November 23, 2021
An issue with application of SPAdes genome assembly in Galaxy
5 61 November 22, 2021
moving galaxy to a new server
0 40 November 22, 2021
Proteomics analysis in a mixed plate with TMT16plex
usegalaxy.eu support
workflow
1 132 November 22, 2021
My Maxquant search reported this error.
usegalaxy.org support
0 24 November 22, 2021
MiXCR clonotype data
usegalaxy.eu support
9 64 November 22, 2021
What is Normalization method used in Deseq2 galaxy
usegalaxy.eu support
tool-dev
3 62 November 22, 2021
"Rescuing" a workflow invocation?
0 43 November 21, 2021
FTP upload could not connect to server
usegalaxy.eu support
ftp-upload
3 59 November 21, 2021
Filtering aligned reads
0 38 November 21, 2021
Removing data from failed jobs
0 33 November 20, 2021
How to display gene names from gff3.gz file in Jbrowse
usegalaxy.org support
galaxy-local ,  jbrowse
1 39 November 19, 2021
Running nextflow nfcore pipelines using a singularity
tool-dev ,  galaxy-local
1 40 November 18, 2021
How to delete a user from admin dashboard?
admin
1 104 November 17, 2021
Kraken: how do I get a Kmer distribution?
usegalaxy.eu support
kraken2-index
2 35 November 17, 2021
How to calculate the differential expression without replicate data
usegalaxy.be support
workflow ,  tool-dev ,  edger
1 36 November 17, 2021