Galaxy Community Help

Topic	Replies	Views	Activity
How to get faster help with your question share-or-publish , troubleshooting , resources How to get faster help with your question We love details! :scientist: Consider Sharing your History or posting screenshots of your Job Information Details page. Questions with details attract the fastest replies! Pleas…	5	729	May 16, 2025
What should I do if my data exceeds the given 250GB of storage? account , storage-dashboard , resources , manage-quota , scratch-space I’m working on a transciptomics data which will probably exceed the given 250GB data. Is there any possible solution to this? for example increasing my storage?	3	1529	August 15, 2024
Troubleshooting resources for errors or unexpected results share-or-publish , troubleshooting , queued-gray-datasets , resources How to troubleshoot your work in Galaxy, and how to ask for help! :mag_right: Review your Job Details → inputs + parameters + logs using the i-icon inside of any dataset. :mortar_board: Learn with a tutorial and custom…	5	10937	April 17, 2024
Remove save tags for history and workflow annotation usegalaxy.eu support workflow	0	1	July 10, 2025
Galaxy 25_0 on GCE, Microarray Tissue Analysis tutorial, ImageJ installation server-admin	11	9	July 10, 2025
Analysis of two identical biological paired-end bulk-RNA samples to derive highly expressed TFs usegalaxy.eu support	0	2	July 10, 2025
NanoFilt Tool - Galaxy usegalaxy.eu support tool-help	0	3	July 10, 2025
Manta turn off depth option does not seem to work properly usegalaxy.eu support tool-dev , tool-help	0	1	July 10, 2025
Locale error when running tools usegalaxy.org support troubleshooting , tool-help	5	29	July 10, 2025
MultiQC webpage not appearing. usegalaxy.org support	0	3	July 10, 2025
McMicro Tissues w/ exemplar-001 test problem: ImageJ command not found galaxy-local , troubleshooting	2	14	July 9, 2025
Error in generating bigwig file after running macs2 usegalaxy.org support macs2	1	6	July 9, 2025
Understanding BLASTX Tabular Output Against Swiss-Prot (25 Columns) genome-annotation	3	8	July 9, 2025
Galaxy for Humanities/Social Sciences	11	305	July 9, 2025
FASTA Filter tool error	8	44	July 9, 2025
Requesting multithreading/CPU support for ORCA calculations in Galaxy Europe for independent research on MCR enzyme inhibition usegalaxy.org support galaxy-local	3	13	July 9, 2025
🔧 gunicorn.sock not created despite Galaxy running — and dependency_resolvers_conf.xml missing server-admin	0	9	July 9, 2025
Peptide Shaker Job Failure usegalaxy.org support proteomics	1	11	July 9, 2025
cut and run: MACS2 error usegalaxy.eu support macs2 , epigenetics , resources , tool-help	7	22	July 9, 2025
Apollo Create or Update Organism error usegalaxy.eu support server-open-issue , tool-help , apollo	4	38	July 8, 2025
CPT Phage Structural Workflow fails at step 25 and I can't access apollo usegalaxy.eu support	4	23	July 8, 2025
structural workflow fails usegalaxy.org support genome-annotation	3	15	July 8, 2025
Apollo Create Organism Naming Conflict Error usegalaxy.eu support tool-help , apollo	2	2	July 8, 2025
Interactive BlobToolKit tool-help	0	3	July 8, 2025
Help with instructions for running Galaxy in our Institute's cluster. usegalaxy.org support galaxy-local , cluster	0	5	July 8, 2025
Scanpy FindVariableGenes tool-help	0	11	July 8, 2025
how to perfom Samtools view tagged.bam \| grep -c “miRNAname” >> genome-basedcounts.tsv usegalaxy.eu support filter-bam	1	11	July 8, 2025
CREx_rearrangement scenario tool-help , revoluzer_crex	0	2	July 8, 2025
Issue with rnaQUAST tool transcriptomics , rna_quast	26	60	July 7, 2025
Concatenation of RNA_Seq technical replicates usegalaxy.org support troubleshooting	6	14	July 7, 2025

How to get faster help with your question

share-or-publish , troubleshooting , resources

How to get faster help with your question We love details! :scientist: Consider Sharing your History or posting screenshots of your Job Information Details page. Questions with details attract the fastest replies! Pleas…

5

729

May 16, 2025

What should I do if my data exceeds the given 250GB of storage?

account , storage-dashboard , resources , manage-quota , scratch-space

I’m working on a transciptomics data which will probably exceed the given 250GB data. Is there any possible solution to this? for example increasing my storage?

3

1529

August 15, 2024

Troubleshooting resources for errors or unexpected results

share-or-publish , troubleshooting , queued-gray-datasets , resources

How to troubleshoot your work in Galaxy, and how to ask for help! :mag_right: Review your Job Details → inputs + parameters + logs using the i-icon inside of any dataset. :mortar_board: Learn with a tutorial and custom…

5

10937

April 17, 2024

Remove save tags for history and workflow annotation

usegalaxy.eu support

workflow