Galaxy Community Help

Topic	Replies	Views	Activity
Troubleshooting resources for errors or unexpected results usegalaxy.org support Check to see if there is a known usegalaxy.* server issue. Server Status: https://status.galaxyproject.org/ If the server was down when you first ran your job, try a rerun once back up. A rerun can also eliminate tra…	1	3367	November 28, 2018
Welcome to Galaxy Community Help	1	1632	November 20, 2018
User deletion must be configured on this instance in order to allow user self-deletion. Please contact an administrator for assistance. admin	0	4	May 14, 2021
FTP: Unable to find retrieve directory listing	0	6	May 14, 2021
Filter data on any column using simple expressions text-manipulation , tabular , filter , cut	4	554	May 14, 2021
Failed Create Kraken2 database after a long time downloading. admin , galaxy-local , data-manager , kraken2-index , datacashe	1	59	May 13, 2021
Problems with Plot Cladogram -- http://huttenhower.sph.harvard.edu/galaxy/ lefse , public-galaxy-server , galaxy-huttenhower	1	63	May 13, 2021
Lefse Cladogram isn't complete -- http://huttenhower.sph.harvard.edu/galaxy/ lefse , public-galaxy-server , galaxy-huttenhower	3	81	May 13, 2021
Jobs paused and web interface (localhost:8080) does not respond. workflow , download , dataset-collection , galaxy-local	4	66	May 13, 2021
Cómo obtener tablas de número de copias a partir de un archivo BAM (Circos) circos	1	16	May 13, 2021
Importing dbNSFP database usegalaxy.org support variant , snpeff , snp , snpsift	2	37	May 13, 2021
DEseq2 error with different numbers of rows usegalaxy.eu support deseq2 , featurecounts , reference-annotation , gtf	12	83	May 13, 2021
How to change the time zone on local instance of Galaxy ? usegalaxy.org support galaxy-local	0	26	May 13, 2021
Download genome into Galaxy usegalaxy.org support custom-genome , data-manager , reference-annotation , reference-genome , datacashe	9	853	May 12, 2021
Installing fastx_barcode_splitter_enhanced usegalaxy.org support	0	26	May 12, 2021
Avoid one history item per output for tool execution with many output files dataset-collection , tool-dev , collections	4	37	May 12, 2021
Mapping to a uploaded reference genome dataset usegalaxy.org support error	0	24	May 12, 2021
Using Dataset Collection	2	35	May 12, 2021
Tool installation stuck at "Cloning" tool-install , cloudman , gvl	2	39	May 12, 2021
No module named 'galaxy_ext' admin , galaxy-local , cluster	5	74	May 11, 2021
Fatal error: exit code 1 () using make.shared usegalaxy.org support troubleshooting , error , metagenomics , mothur , error-metadata	0	33	May 11, 2021
Error when using "galaxy.jobs.runners.cli" as a runner plugin job in Galaxy usegalaxy.org support galaxy-local , error	2	57	May 10, 2021
Unassigned_Ambiguity problem in featureCounts usegalaxy.org support featurecounts	4	54	May 10, 2021
Transcriptome tutorial files usegalaxy.eu support rna-seq , tutorial , public-galaxy-server	1	39	May 9, 2021
Need more Galaxy storage usegalaxy.org support admin , storage	1	44	May 9, 2021
Fastq to BAM file error	2	48	May 7, 2021
CIRCOS fatal error usegalaxy.org support tool-install , server-side-error	6	157	May 7, 2021
Error when building Build the BWA index	0	43	May 7, 2021
If I set the LDA score below the default value of 2.0, is it still statistically reliable? lefse	0	43	May 6, 2021
Running 4 lefse analysis at the same time in order to save space for graphic usegalaxy.org support lefse	2	234	May 5, 2021

Troubleshooting resources for errors or unexpected results

Check to see if there is a known usegalaxy.* server issue. Server Status: https://status.galaxyproject.org/ If the server was down when you first ran your job, try a rerun once back up. A rerun can also eliminate tra…