usegalaxy.org support

Topic	Replies	Views	Activity
This place is for Galaxy Main server support and discussion If you have a problem or question regarding usegalaxy.org, create topic here. For other servers please see the list of categories.	1	982	November 26, 2018
Output files for DESeq2 and EdgeR pairwise comparison server-admin , workflow , transcriptomics	1	13	April 26, 2024
RPStblastn subject defline(s) troubleshooting , blast	1	11	April 26, 2024
Running to long for processing metagenomics , queued-gray-datasets , mothur	1	15	April 26, 2024
RESOLVED April 17 2024: Maintenance event at UseGalaxy.org (No destinations are available to fulfill request) troubleshooting	17	258	April 25, 2024
Filter with SortMeRNA option for generating statistics file missing troubleshooting , tool-help , bg_sortmerna	3	25	April 25, 2024
How to download the required output file using api workflow , api	2	46	April 23, 2024
Adding genome reference? reference-index , custom-genome , reference-annotation , reference-genome	2	118	April 23, 2024
Why my data is not saved in scratch? manage-quota , scratch-space	2	33	April 20, 2024
Convert RNA STARsolo output to AnnData format single-cell	1	30	April 18, 2024
Issues with Qualimap BamQC Tool: Fatal Error Exit Code 1 and Input Mapping File Not Found galaxy-local , troubleshooting	1	47	April 17, 2024
Help with Salmon and edgeR transcriptomics , edger	2	449	April 17, 2024
error with RNA STAR rna-seq	1	43	April 17, 2024
Question about scRNA-seq Galaxy tutorial server-admin , transcriptomics , single-cell	2	81	April 16, 2024
Add tools in usegalaxy.org tool-install	2	255	April 15, 2024
Adding new tool to usegalaxy.org tool-dev	2	265	April 15, 2024
Cant upload data, disk quota full, but its not upload	1	50	April 15, 2024
Using api to report errors api	4	120	April 12, 2024
Error using tool "Download and Extract Reads in FASTQ format from NCBI SRA" ncbi , sra , server-open-issue	1	52	April 11, 2024
limma-voom multiple factors & groups transcriptomics , limma_voom	1	67	April 10, 2024
Cannot open file in xcms adjustRtime (retcor) metabolomics	4	45	April 10, 2024
Metadata generation failed troubleshooting	1	91	April 9, 2024
Batch factor correction in DeSeq2 workflow	2	562	April 9, 2024
Extract rDNA reads from sequencing reads fasta-manipulation , troubleshooting , bwa_mem2	3	64	April 9, 2024
Is Samtools Faidx Available on Galaxy US? troubleshooting	4	74	April 9, 2024
AnnotatemyID warning and warning reappears as fatal error during limma DE troubleshooting , transcriptomics	2	50	April 9, 2024
Deleting sequence identifier line fasta-manipulation	1	40	April 9, 2024
RepeatModeler run time server-admin , tool-help	1	42	April 9, 2024
rnaseq count files not being recognized by Limma, deseq2, edgeR troubleshooting , transcriptomics	1	101	April 8, 2024
Issues with FASTA fetch on local galaxy instance troubleshooting	7	57	April 8, 2024