usegalaxy.org support

Topic	Replies	Views	Activity
This place is for Galaxy Main server support and discussion If you have a problem or question regarding usegalaxy.org, create topic here. For other servers please see the list of categories.	1	1128	November 26, 2018
How to construct input dict when running a tool in Galaxy externally through API? tool-help	0	1	June 17, 2025
Error message when Annotating Deseq2	0	4	June 17, 2025
Problem with STARsolo chimeric alignments output as separate tabular junctions in Galaxy workflow , transcriptomics , tool-help , rna_starsolo	0	1	June 17, 2025
Mordred descriptor calculation	1	5	June 14, 2025
Error with running EGSEA transcriptomics , tool-help , egsea	1	6	June 14, 2025
Inconsistent Memory Errors While Running RNA STARSolo	2	11	June 13, 2025
STARsolo runs out of memory on the BAM sorting step rna-seq , rna_starsolo	2	8	June 13, 2025
Cannot Preview BAM File on usegalaxy.org – "Unknown or invalid visualization: igv" server-open-issue	6	73	June 12, 2025
Bacterial genome sequence analysis mapping , blast , makeblastdb , tool-help , ncbi_tblastn_wrapper	1	5	June 12, 2025
Want to add a new organism for HISAT2 analysis reference-index , reference-annotation , reference-genome	1	9	June 12, 2025
Annotate DESeq2/DEXSeq output table error tool-help , deg_annotate	4	17	June 10, 2025
How to set alignIntronMax parameter in RNA STARSolo in Galaxy? tool-help , single-cell , rna_starsolo	8	24	June 10, 2025
Colabfold Alphafold - error colabfold	11	19	June 10, 2025
Colabfold MSA- error tool-help , colabfold	11	71	June 10, 2025
save (and load) files on local host from Interactive Tool interactive-tools	43	114	June 10, 2025
ATAC Seq wig to bigwig transformation of MACS2 data workflow , tool-help	6	30	June 9, 2025
Workflows etc. not working	10	51	June 9, 2025
ATAC-seq and chromatin accessibity IGV view workflow , tool-help	0	9	June 6, 2025
Upload help -- internet connections to local data or via URL upload	1	14	June 5, 2025
current issue in running my sequencing files troubleshooting	0	13	June 5, 2025
PyCaret Model Comparison tool-help	0	4	June 5, 2025
Issue with "Insert Indel Qualities" Step in Galaxy Training Material after recent upgrade variant-analysis	1	12	June 4, 2025
structural workflow fails genome-annotation	1	11	June 4, 2025
Annotate DESeq2/DEXSeq tool error gtn-tutorial , transcriptomics	6	20	June 3, 2025
Host Removal with BBMap	0	10	June 3, 2025
Cannot access the ORG server	0	8	June 3, 2025
Trouble Uploading Large Files upload	4	25	June 3, 2025
galaxy tool xml file fetching files into a collection tool-dev	7	47	June 2, 2025
Running galaxy stuck with "Activating virtualenv at .venv Updating service Gunicorn" tool-help	3	8	June 2, 2025