usegalaxy.org support

Topic	Replies	Views	Activity
This place is for Galaxy Main server support and discussion If you have a problem or question regarding usegalaxy.org, create topic here. For other servers please see the list of categories.	1	1130	November 26, 2018
staramr deprecation? tool-help , staramr_search	0	1	June 30, 2025
yarn errors building 25.0 release on Ubuntu galaxy-local	0	5	June 29, 2025
Locale error when running tools troubleshooting , tool-help	3	14	June 28, 2025
Random failures when concatenating fastqsanger.gz datasets via collection– "Not in GZIP format" errors	0	5	June 27, 2025
MACS2 cutoff analysis macs2	0	5	June 25, 2025
Concatenation of RNA_Seq technical replicates troubleshooting	2	6	June 25, 2025
Job submission failed. Uncaught exception in exposed API method: for Intersect the intervals of two datasets gtn-tutorial	1	7	June 25, 2025
Metaspades Single Reads	0	3	June 25, 2025
How can I rename a paired Fastq file?	4	30	June 24, 2025
Free energy landsape using Bio3d in galaxy tool-help , bio3d_pca	0	3	June 22, 2025
Asking about qiime2 tools import tool-help , qiime2_core__tools__import	0	4	June 20, 2025
How to construct input dict when running a tool in Galaxy externally through API? tool-help	0	2	June 17, 2025
Error message when Annotating Deseq2	0	14	June 17, 2025
Problem with STARsolo chimeric alignments output as separate tabular junctions in Galaxy workflow , transcriptomics , tool-help , rna_starsolo	0	2	June 17, 2025
Mordred descriptor calculation	1	6	June 14, 2025
Error with running EGSEA transcriptomics , tool-help , egsea	1	7	June 14, 2025
Inconsistent Memory Errors While Running RNA STARSolo	2	11	June 13, 2025
Cannot Preview BAM File on usegalaxy.org – "Unknown or invalid visualization: igv" server-open-issue	6	73	June 12, 2025
Bacterial genome sequence analysis mapping , blast , makeblastdb , tool-help , ncbi_tblastn_wrapper	1	6	June 12, 2025
Want to add a new organism for HISAT2 analysis reference-index , reference-annotation , reference-genome	1	9	June 12, 2025
Annotate DESeq2/DEXSeq output table error tool-help , deg_annotate	4	18	June 10, 2025
How to set alignIntronMax parameter in RNA STARSolo in Galaxy? tool-help , single-cell , rna_starsolo	8	24	June 10, 2025
Colabfold Alphafold - error colabfold	11	22	June 10, 2025
Colabfold MSA- error tool-help , colabfold	11	73	June 10, 2025
save (and load) files on local host from Interactive Tool interactive-tools	43	114	June 10, 2025
ATAC Seq wig to bigwig transformation of MACS2 data workflow , tool-help	6	31	June 9, 2025
Workflows etc. not working	10	51	June 9, 2025
ATAC-seq and chromatin accessibity IGV view workflow , tool-help	0	11	June 6, 2025
Upload help -- internet connections to local data or via URL upload	1	16	June 5, 2025