usegalaxy.org support

Topic	Replies	Views	Activity
Troubleshooting resources for errors or unexpected results Check to see if there is a known usegalaxy.* server issue. Server Status: https://status.galaxyproject.org/ If the server was down when you first ran your job, try a rerun once back up. A rerun can also eliminate tra…	2	2426	November 28, 2018
This place is for Galaxy Main server support and discussion If you have a problem or question regarding usegalaxy.org, create topic here. For other servers please see the list of categories.	2	260	November 26, 2018
Duplicate row.names error (NOT DUE TO HEADER) error	8	12	August 7, 2020
Non-available Reference genomes in Galaxy (for plants)	5	46	August 6, 2020
Issue with history file export	14	51	August 4, 2020
Internal server error (500) download , error , server-side-error	7	498	August 4, 2020
Project help...(variant analysis) variant	2	212	August 3, 2020
Samtool merge error after HISAT2	8	78	August 3, 2020
Trinity still waiting to run	1	19	August 3, 2020
issue with join maf by species error	4	37	August 2, 2020
Featurecounts tool update request tool-dev , featurecounts	9	64	August 1, 2020
Kraken2 missing Kraken databases usegalaxyorg , usegalaxyeu	2	40	July 29, 2020
Cannot download bam csi index with HISAT2 or RNA STAR bam , error , hisat2 , rna-star	3	40	July 28, 2020
Why doesn't searching in tool search box for "Filter by quality" does not bring up the tool? tutorial	2	21	July 28, 2020
HISAT2 runs successfully with 76% alignment reported but empty BAM file (71 bytes)	9	55	July 28, 2020
Analyzing tRNA small-seq reads with htseq-count htseq-count	3	35	July 28, 2020
bigWigToBedGraph: command not found - fatal error 127 galaxy-local	8	49	July 28, 2020
Database error: No alias or index file	1	41	July 25, 2020
BWA-MEM Index can't be found	3	67	July 23, 2020
Clasification, CART model	1	32	July 21, 2020
Retrieving locally installed galaxy after OS crash	4	43	July 21, 2020
rule based upload successful but having fastqc error	1	32	July 20, 2020
Downloading Large Files - 1Gb Limit (Galaxy Main \| wget \| curl \| API Key) history-download , history-upload , download , curl , wget	13	1054	July 17, 2020
FastQC doesn't work fastqc , error , ftp-upload	16	2068	July 16, 2020
16s rDNA ion torrent sequence 16s	1	35	July 15, 2020
analyzing PCA graph from MD simulation	2	50	July 15, 2020
Issue with StringTie input , troubleshooting , stringtie	4	314	July 15, 2020
Join all of my datasets in one column admin	1	29	July 14, 2020
Clasification model	1	30	July 13, 2020
Converting Fastq.gz admin	12	180	July 13, 2020

Troubleshooting resources for errors or unexpected results

Check to see if there is a known usegalaxy.* server issue. Server Status: https://status.galaxyproject.org/ If the server was down when you first ran your job, try a rerun once back up. A rerun can also eliminate tra…