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GTDB-TK version 2.4.0 included in my workflow due to a broken latest version 2.7.2 is expiring soon
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0
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10
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October 10, 2026
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MiRDeep2_no_inbuilt_reference_genome(whitespace issue with file uploaded)
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1
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27
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October 6, 2026
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NUCmer/MUMmer dotplot job exceeds memory allocation for ~1 Gb alligator gar genomes
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1
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21
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October 6, 2026
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miRge3 reference library not available in the server
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8
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68
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October 5, 2026
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Panaroo 1.8.0+galaxy0 fails on GFF3 collection with FileNotFoundError: input_directory/*.gff
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7
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143
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September 28, 2026
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BEAST2 tool fails with ClassNotFoundException on Galaxy
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1
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35
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September 23, 2026
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Funannotate BUSCO models - mucorales missing
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1
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41
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September 14, 2026
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Confirmed and pending status: Tool "Retrieve bold" is not working : warning message + log
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2
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94
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September 7, 2026
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Prodigal Gene Predictor: error option (# Other genetic codes 1-25) stderr Invalid translation table specified
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1
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79
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September 7, 2026
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STARsolo custom reference fails during genomeGenerate — need genomeChrBinNbits for fragmented Nicotiana genome
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4
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106
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September 3, 2026
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Dorado now missing from usegalaxy.eu site...?
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4
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104
|
September 3, 2026
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Pre.cluster (mothur) empty outputs: consider using groups! Please see tutorial example
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1
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72
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August 27, 2026
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Jobs stuck in 'new' state — Faster Download and Extract Reads in FASTQ
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4
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86
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August 25, 2026
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HUMAnN Collection Mapping Launch Failure
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1
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55
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August 18, 2026
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HUMAnN error version
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1
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60
|
August 14, 2026
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Help ChewBBACA: using collection folders and NormalizeFasta to avoid "ValueError: This FASTA file contains comments "
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5
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94
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August 13, 2026
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"Invalid storage location" when trying to move data to Backblaze B2
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5
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104
|
August 12, 2026
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ABRicate databases and tool versions in workflows
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3
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113
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August 11, 2026
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Notebooks: more about memory resources and HTP analysis
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2
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93
|
August 11, 2026
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Interactive JupyterLab Notebook - use terminal for RNA-seq alignment
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1
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53
|
August 10, 2026
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Busco string_type error
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1
|
57
|
August 10, 2026
|
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GTDB-Tk, reference data, and job queues: leave jobs queued for this competitive cluster group!
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3
|
82
|
August 10, 2026
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Abnormally long-running BRAKER3 job on usegalaxy.eu
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2
|
72
|
August 6, 2026
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Diamond indexes: synchronizing across UseGalaxy servers
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|
1
|
51
|
August 5, 2026
|
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Datamash across many columns
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|
1
|
42
|
August 5, 2026
|
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MrBayes consensus tree file not shown in output
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2
|
89
|
July 30, 2026
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MrBayes - no output files found
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4
|
158
|
July 30, 2026
|
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Increase FragPipe’s allocated memory
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3
|
74
|
July 20, 2026
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GTDB-Tk Classify genomes error type 3
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|
5
|
142
|
July 13, 2026
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Current implementation of GTDB-Tk Classify genomes is broken (wrong default arguments)
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|
1
|
102
|
July 12, 2026
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