|
FAQ: Create a Qiime2 qza artifact from a Galaxy collection in ONE STEP!
:partying_face: Try the new QZA creation method!
Creating a Qiime2 qza artifact :magic_wand: directly from a Galaxy Collection
1. Create your Galaxy Collection!
Single end will have the collection shape List
Paired end…
|
|
0
|
113
|
February 25, 2026
|
|
Why collections?
Collections are one of the super-killer features of Galaxy!
By Anton Nekrutenko
October 21, 2025
|
|
0
|
242
|
October 21, 2025
|
|
qiime2 tools import
|
|
8
|
665
|
February 25, 2026
|
|
Make.contigs in a list:paired collection
|
|
1
|
21
|
February 10, 2026
|
|
Addition of several plots to MultiQC
|
|
3
|
34
|
February 6, 2026
|
|
Splittng Paired End Sequences and MultiQC of Paired Sequences
|
|
4
|
69
|
February 3, 2026
|
|
Retrieve the names of my samples (element identifier) in a collection so that I can aggregate them with the names of my contigs
|
|
4
|
49
|
January 9, 2026
|
|
Error in using Bowtie2
|
|
2
|
70
|
December 18, 2025
|
|
Choosing datafiles for DESeq2
|
|
3
|
187
|
December 9, 2025
|
|
How do I create and visualize a nested paired list
|
|
1
|
33
|
November 3, 2025
|
|
Salmon Quant paired-end read entry
|
|
1
|
66
|
November 3, 2025
|
|
Cannot match collection types
|
|
2
|
61
|
November 2, 2025
|
|
Download and Extract reads in FASTQ format from NCBI SRA in workflow issue
|
|
5
|
298
|
October 27, 2025
|
|
FASTQ Paired Reads Splitter?
|
|
3
|
76
|
October 22, 2025
|
|
Qimme2 tools import issue
|
|
1
|
29
|
October 17, 2025
|
|
Workflows: job queues and managing partial failures with Resume and Replace!
|
|
3
|
95
|
October 14, 2025
|
|
Panaroo & PanTA: sample recognition troubleshooting
|
|
4
|
220
|
October 8, 2025
|
|
Bowtie2 -- Paired end samples? Use a List of Pairs collection!
|
|
5
|
198
|
October 3, 2025
|
|
Why can’t separate files be used in FASTP? Creating a paired end collection folder (data shapes and organization)
|
|
5
|
117
|
October 1, 2025
|
|
Collection folder VIDEO: How to create a single or paired end dataset collection folder (shapes and organization)
|
|
3
|
101
|
September 29, 2025
|
|
How do I use galaxy tools to create a paired end collection folder (data shapes and organization)
|
|
2
|
128
|
December 3, 2024
|
|
Collection to separate files
|
|
1
|
55
|
September 22, 2025
|
|
Creating folders/segregate files
|
|
3
|
70
|
September 3, 2025
|
|
Qiime2 import troubleshooting: Retain original Illumnia file names + use simple list collection
|
|
2
|
131
|
August 8, 2025
|
|
Alleyoop - unable to select dataset collections for bam, tsv, and vcf files
|
|
3
|
51
|
August 5, 2025
|
|
Concatenate multiple datasets tool; combining all fastq.gz files under a single barcode to one fastq.gz file
|
|
6
|
327
|
July 22, 2025
|
|
Random failures when concatenating fastqsanger.gz datasets via collection– "Not in GZIP format" errors
|
|
2
|
78
|
July 22, 2025
|
|
How can I rename a paired Fastq file?
|
|
4
|
108
|
June 24, 2025
|
|
Extract dataset
|
|
1
|
67
|
June 12, 2025
|
|
Format issues while trying yo use rnaviralspades
|
|
2
|
53
|
June 11, 2025
|