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DESeq2 factors and factor level Input
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4
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53
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May 5, 2026
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Issue with edgeR results for endometrial dataset
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3
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34
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April 30, 2026
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Issue at RNA-STAR step: adjusting GTF annotation
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3
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37
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April 22, 2026
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Fatal error: using trinity
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2
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933
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April 18, 2026
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Error with de novo assembly using Trintiy
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5
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417
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April 18, 2026
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Improve genome annotation with RNA-Seq data
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1
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551
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April 8, 2026
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Custom PCA plot in Deseq2
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3
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582
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April 8, 2026
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cummeRbund tool tutorials guide
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1
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17
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April 6, 2026
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GoSeq GO analysis importing a gene categories file
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1
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24
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April 1, 2026
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Ouput unaligned reads into bam file with hisat2
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1
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25
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March 18, 2026
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EdgeR shows 0 dataset
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1
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10
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March 1, 2026
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Transcriptomics in Galaxy: Overview, Guides, Production Workflows
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3
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27
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February 18, 2026
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ChIP sequencing
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1
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19
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February 16, 2026
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Generating tx2gene map and filtering for rnaSPAdes (de novo)
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3
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45
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January 31, 2026
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Gene and transcript level quant using salmon
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4
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83
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January 8, 2026
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"`CXXABI_1.3.13' not found" when running Salmon
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3
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216
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December 23, 2025
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GO enrichment on up and down regulated genes on treated sample
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1
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67
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December 15, 2025
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Workflow cannot be executed Uncaught exception in exposed API method
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1
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36
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December 9, 2025
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How to perform quality trimming without adapter removal in Cutadapt?
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1
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45
|
December 8, 2025
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GWAS troubleshooting
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3
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52
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December 4, 2025
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Genome wide alternate splicing analysis - IsoformSwitchAnalyzeR error from StringTie input - no CDS
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9
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308
|
August 7, 2024
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Using CHM13v2.0 T2T and mm39 gene annotations for RNASeq Analysis
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3
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161
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December 3, 2025
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Is a "?" in featureCounts' database field a problem when using a non-built-in genome?
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1
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59
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November 24, 2025
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miRNA alignment on Bowtie2/miRDeep
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1
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57
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November 15, 2025
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[Beginner Question] Identifying Gene ID vs Protein ID
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1
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54
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November 11, 2025
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BAM/SAM Mapping Stats
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1
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38
|
November 3, 2025
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Suggestions for Reliable Alternative Splicing Workflow in Galaxy?
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1
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38
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October 27, 2025
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Download and Extract reads in FASTQ format from NCBI SRA in workflow issue
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5
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278
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October 27, 2025
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Memory error with rnaSPAdes? Try QA/QC and Sub-sample sequences
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1
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50
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September 30, 2025
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Assembly statistics in reference based RNA seq analysis_tools
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1
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299
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September 6, 2023
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