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Build expression matrix error
|
|
2
|
37
|
October 30, 2026
|
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Generate gene to transcript map
|
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1
|
22
|
October 30, 2026
|
|
DEseq2 error with salmon-quant input
|
|
1
|
19
|
October 29, 2026
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Error in "Align reads and estimate abundance"
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2
|
59
|
October 27, 2026
|
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Trinity read normalization
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1
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37
|
October 26, 2026
|
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Metatranscriptomic analysis fails to determine pathwasy with HUMAnN
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3
|
65
|
October 3, 2026
|
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STARsolo custom reference fails during genomeGenerate — need genomeChrBinNbits for fragmented Nicotiana genome
|
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4
|
130
|
September 3, 2026
|
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Immediate error when running RNA STAR
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2
|
81
|
August 25, 2026
|
|
Featurecounts error with reference GTF file
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1
|
75
|
August 24, 2026
|
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Notebooks: more about memory resources and HTP analysis
|
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2
|
110
|
August 11, 2026
|
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Stringtie help related to GTF file for zebrafish genome
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2
|
64
|
July 28, 2026
|
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lncRNA pipeline using GENCODE files
|
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2
|
89
|
July 20, 2026
|
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ChiRa for Chimeric eClip data processing - Split ChiRa collapse out put as files to large processing
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1
|
63
|
July 6, 2026
|
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DEseq2: Interpreting 3 or more factor levels
|
|
1
|
67
|
July 6, 2026
|
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How to set the reference level in DESeq2 for treatment vs control comparison?
|
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1
|
74
|
July 6, 2026
|
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DESeq2 factors and factor level Input
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4
|
116
|
May 5, 2026
|
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Issue with edgeR results for endometrial dataset
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3
|
81
|
April 30, 2026
|
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Issue at RNA-STAR step: adjusting GTF annotation
|
|
3
|
118
|
April 22, 2026
|
|
Fatal error: using trinity
|
|
2
|
982
|
April 18, 2026
|
|
Error with de novo assembly using Trintiy
|
|
5
|
480
|
April 18, 2026
|
|
Improve genome annotation with RNA-Seq data
|
|
1
|
575
|
April 8, 2026
|
|
Custom PCA plot in Deseq2
|
|
3
|
628
|
April 8, 2026
|
|
cummeRbund tool tutorials guide
|
|
1
|
37
|
April 6, 2026
|
|
GoSeq GO analysis importing a gene categories file
|
|
1
|
50
|
April 1, 2026
|
|
Ouput unaligned reads into bam file with hisat2
|
|
1
|
56
|
March 18, 2026
|
|
EdgeR shows 0 dataset
|
|
1
|
38
|
March 1, 2026
|
|
Transcriptomics in Galaxy: Overview, Guides, Production Workflows
|
|
3
|
136
|
February 18, 2026
|
|
ChIP sequencing
|
|
1
|
42
|
February 16, 2026
|
|
Generating tx2gene map and filtering for rnaSPAdes (de novo)
|
|
3
|
112
|
January 31, 2026
|
|
Gene and transcript level quant using salmon
|
|
4
|
225
|
January 8, 2026
|