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Assembly statistics in reference based RNA seq analysis_tools
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1
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295
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September 6, 2023
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How to extract count matrix from BAM files of scRNA-seq experiment in Galaxy Server?
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1
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165
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April 10, 2025
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Feature count on exon level instead gene level
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4
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199
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July 22, 2025
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UCSC Reference Genome and GTF Fatal Error no valid exons in the GTF file
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3
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202
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January 22, 2025
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Genes from my reference genome are not annotated in output files. Trying to get read count per gene/abundant gene list
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1
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35
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October 1, 2024
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Intersection between two datasets/lists of genes
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2
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70
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August 24, 2024
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Heatmaps of DEGs presented as z-scores/RNA-seq
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0
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174
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August 8, 2024
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bedtools intersect intervals
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5
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406
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June 21, 2024
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Title: Scatter plot showing correlation among ChIP-seq and RNA-seq data
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2
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230
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June 7, 2024
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error with RNA STAR
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1
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159
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April 17, 2024
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Mstrg convertion into gene symbol. Is this possible?
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2
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449
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July 22, 2025
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Problem with Output files with pRESTO via Galaxy
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10
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465
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January 22, 2024
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Analysis of splice variants.
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4
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437
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January 2, 2024
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problemas herramientas
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1
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174
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November 20, 2023
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Error with HTseq RNAseq read count
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1
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356
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November 17, 2023
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Issue with StringTie
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5
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1938
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December 20, 2023
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StringTie producing empty column for gene and transcript counts
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9
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625
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December 21, 2023
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fgsea of gene sets in .gmt does not provide any output
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1
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472
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November 6, 2023
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Smart-seq2 data analysis
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2
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772
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November 2, 2023
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Deseq2 analysis output too many DEGs
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1
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292
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October 26, 2023
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RNA-Seq analysis in Galaxy
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12
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878
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December 21, 2023
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Problem in DESe2 with multiple factors
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3
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279
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October 24, 2023
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Basic Question - FPKM Count - What do I use as the reference gene model?
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2
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564
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December 21, 2023
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Fatal error: An undefined error occurred.
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1
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267
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October 17, 2023
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Help with interpreting GO enrichment resutls using goseq
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6
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947
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October 12, 2023
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Question regarding goseq in RNA-SEQ tutorial
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2
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401
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September 28, 2023
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"error in importRdata" using isoformswitchanalyzR
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14
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755
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September 12, 2023
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DESeq2 with pair end file (Stringtie)
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1
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241
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September 5, 2023
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annotateMyIDs (Galaxy Version 3.17.0+galaxy1) not working
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2
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371
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August 31, 2023
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Problem in "gffread Filters and/or converts GFF3/GTF2"
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2
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364
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December 21, 2023
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