Topics tagged ucsc

Topic	Replies	Views	Activity
Building custom track for BAM files ucsc	2	31	September 22, 2025
Importing from USCS main table browser - invalid HTML content usegalaxy.org support server-side-error , ucsc , upload-html	4	366	September 2, 2025
BigWig track colour usegalaxy.eu support ucsc , ucsc_wigtobigwig	1	42	February 28, 2025
UCSC Reference Genome and GTF Fatal Error no valid exons in the GTF file usegalaxy.eu support custom-genome , mapping , fastq-format-error , ucsc , rna-seq , featurecounts , fastq-format , rna_star	3	194	January 22, 2025
No link for UCSC to visualise datasets database , troubleshooting , igv , ucsc	23	495	May 24, 2024
UCSC link using Galaxy to see RNA seq peaks igv , ucsc , visualization , tool-help	1	188	April 30, 2024
"Introduction to Genomics and Galaxy" GENCODE V41 unavailable usegalaxy.org support troubleshooting , tutorial-feedback , ucsc	2	194	February 15, 2024
"From peaks to genes" error with UCSC Main usegalaxy.eu support troubleshooting , ucsc , upload-html	6	431	August 28, 2025
Troubleshooting Galaxy dataset link-outs to UCSC Genome Browser usegalaxy.eu support igv , datatype , ucsc , visualization	7	900	July 3, 2023
send files from Galaxy to UCSC's EU mirror ucsc , server-open-issue , vcf , evolution	11	929	May 19, 2023
Cannot open file with UCSC Genome Browser: Resolved usegalaxy.org support server-admin , ucsc , server-open-issue	2	1114	November 14, 2022
Tutorial problems: Function "Get Data > UCSC main" can log out of Galaxy. Solution: Avoid Chrome, Use Safari or Firefox instead usegalaxy.org support get-data , ucsc , server-open-issue	2	722	June 22, 2021
Output of UCSE table browser get data creates a new history and logs the user out. usegalaxy.org support history , ucsc , server-open-issue	2	779	April 20, 2021
Trackster not adding multiple datasets usegalaxy.eu support trackster , tool-deprecated , igv , custom-build , ucsc	3	950	February 10, 2023