Topics tagged tool-help

Topic	Replies	Views	Activity
HISAT2 Error--Input library collection must match # inputs for reference genome? usegalaxy.org support tool-help , hisat2	2	8	November 20, 2024
SnpEff database compatibility server-open-issue , tool-help , snpeff	8	21	November 20, 2024
PhyloseqR not showed up, not working server-open-issue , tool-help , interactive_tool_phyloseq	13	38	November 19, 2024
MyriMatch - Trouble uploading raw MS file usegalaxy.org support datatype , tool-help , myrimatch	23	39	November 18, 2024
Seurat FilterCells tool-help , single-cell , seurat_filter_cells , seurat , seurat_create_seurat_object	2	13	November 16, 2024
khmer: Extract partitions usegalaxy.org support tool-help , khmer_extract_partitions	6	4	November 14, 2024
how to run BRAC1 IN GALAXY tool-help	1	3	November 13, 2024
Hicup Pipeline broken usegalaxy.org support tool-help , hicup_hicup	1	5	November 13, 2024
Shovill and Pilon correction usegalaxy.eu support tool-help , shovill	1	6	November 12, 2024
Make.contigs (Mothur error) tool-help , mothur , mothur_make_contigs	12	34	November 11, 2024
Annotate DESeq2/DEXSeq output tables usegalaxy.org support tool-help , deg_annotate	5	24	November 8, 2024
PICRUSt2 Full pipeline tool-help , picrust2_pipeline , picrust	4	18	November 7, 2024
Interproscan format issues usegalaxy.eu support troubleshooting , mapping , tool-help	3	21	November 7, 2024
Error (Red) from “Generate MD topologies for small molecules ( Galaxy version 21.3+galaxy0)”. usegalaxy.eu support tool-help , gromacs , ambertools_acpype	7	11	November 7, 2024
Cannot get QIIME2 artifact to work usegalaxy.eu support troubleshooting , tool-help , qiime2 , qiime2_core__tools__import	5	27	November 7, 2024
Snpeff eff error due to incompatible database version usegalaxy.org support tool-help , snpeff , snpeff_build_gb	3	25	November 5, 2024
RNA STARSolo out of memory: where to adjust memory/node? usegalaxy.org support exceeds-memory-error , tool-help , rna_starsolo	3	20	November 4, 2024
Pear output format tool-help , pear	7	17	November 4, 2024
Gene ID's being filtered out in ChipSeq analysis usegalaxy.org.au support chip-seq , data-manipulation , reference-annotation , tool-help , get_flanks1	5	16	November 4, 2024
How to analyze trimmed reads by Shovill Faster Spades Assembly tool assembly , spades , tool-help , shovill	2	34	October 31, 2024
Kraken 2 databases tool-help , kraken2	3	609	October 30, 2024
De-multiplex paired-end reads usegalaxy.org support collections , tool-help , __apply_rules__	1	10	October 30, 2024
plotCoverage bin count names usegalaxy.org support relabel-collection , collections , tool-help	2	11	October 29, 2024
Extract Pairwise MAF Blocks tool-help , interval2maf_pairwise1	3	14	October 29, 2024
Trinity assembly failure tool-help , trinity	7	19	October 29, 2024
FragPipe - Academic Research and Education User License (Non-Commercial) proteomics , tool-help , fragpipe	1	9	October 29, 2024
Taxonomy-to-Krona tool-help , mothur_taxonomy_to_krona	3	22	October 29, 2024
GROMACS initial setup tool-help , gmx_setup , gromacs	4	18	October 29, 2024
Extract dataset tool tool-help , __extract_dataset__	1	16	October 28, 2024
Feature counts built-in annotation file - no options available transcriptomics , reference-annotation , tool-help , featurecounts	2	14	October 28, 2024