Topics tagged tool-help

Topic	Replies	Views	Activity
CheckM lineage_wf usegalaxy.org support tool-help , checkm_lineage_wf	1	4	January 31, 2025
read normalization usegalaxy.org support resources , tool-help , deseq2	3	4	January 31, 2025
Colabfold MSA- error usegalaxy.org support tool-help , colabfold	9	17	January 30, 2025
IQ-TREE bootstrap confidence/value trees usegalaxy.org support tool-help , evolution	1	3	January 29, 2025
Issues with using a reference transcriptome in kallisto quant usegalaxy.eu support transcriptomics , tool-help , kallisto_quant	1	9	January 28, 2025
Kleborate Error usegalaxy.eu support tool-help , kleborate	1	13	January 28, 2025
Visualize with Krona tool tool-help , taxonomy_krona_chart , krona_text	1	7	January 28, 2025
eggNOG Mapper orthologous genes tool-help , eggnog_mapper_search , eggnog_mapper , eggnog_mapper_annotate	1	5	January 28, 2025
Bismark Meth. Extractor version to generate coverage file usegalaxy.eu support tool-install , tool-help , bismark_methylation_extractor	1	16	January 22, 2025
Toubleshooting BiG-Scape output usegalaxy.eu support tool-help , bigscape	1	10	January 21, 2025
RSEM prepare reference usegalaxy.eu support reference-index , tool-help , rsem_prepare_reference	3	12	January 16, 2025
What should I do to upload the data on LefSe server properly? usegalaxy.org support lefse , tool-help	4	12	January 16, 2025
Krakentools output file is empty usegalaxy.org.au support tool-help	1	8	January 14, 2025
VIBRANT reference data tool-help , vibrant	3	9	January 13, 2025
ClustalW tool and MSA sequence usegalaxy.eu support tool-help , clustalw	1	9	January 10, 2025
error: Job output file grew too large (greater than 200.0 GB) usegalaxy.org support tool-help	3	17	January 10, 2025
Manta tool not working tool-help , manta	1	3	January 9, 2025
[Errno 116] Stale file handle: '/corral4/main' at UseGalaxy.org Jan 8 2024 usegalaxy.org support tool-help , fastqc	4	16	January 9, 2025
MOB-Typer unstable results usegalaxy.eu support tool-help	10	22	January 9, 2025
Filtering FASTQ fiiles using Phred scores tool-help , fastq_masker_by_quality , fastq_manipulation	1	12	January 6, 2025
Prokka default Database prokka , tool-help	2	12	January 4, 2025
insight using Paraview interactive tool usegalaxy.eu support tool-help	3	14	January 3, 2025
SnpSift Filter help tool-help , snpsift_filter	1	15	January 3, 2025
LUMPY index file error -- Add Read Groups to your BAM tool-help , lumpy_sv	5	17	December 30, 2024
manta SV is generating no output files usegalaxy.eu support tool-help , variant-analysis , manta	1	11	December 21, 2024
Visualize with Krona text-manipulation , metagenomics , tool-help , open-tutorial-issue , krona-text	11	45	December 20, 2024
TSEBRA-input files annotation , tool-help , tsebra	4	26	December 18, 2024
HISAT2 reference genome for zooplankton usegalaxy.org support tool-help , hisat2 , microgalaxy	1	13	December 16, 2024
Converting bedgraph to bigwig, product files 0 bytes usegalaxy.org support troubleshooting , tool-help , ucsc_wigtobigwig	7	42	December 12, 2024
Salmonquant didnot work using my Reference transcriptome transcriptomics , tool-help , reference-transcriptome , salmon	2	18	December 9, 2024