Topics tagged resources

Topic	Replies	Views	Activity
How to get faster help with your question Resources share-or-publish , troubleshooting , resources How to get faster help with your question We love details! :scientist: Consider Sharing your History or posting screenshots of your Job Information Details page. Questions with details attract the fastest replies! Pleas…	0	838	January 12, 2024
What should I do if my data exceeds the given 250GB of storage? Resources account , storage-dashboard , resources , manage-quota , scratch-space , usegalaxy-fr I’m working on a transciptomics data which will probably exceed the given 250GB data. Is there any possible solution to this? for example increasing my storage?	1	1783	August 12, 2024
Troubleshooting resources for errors or unexpected results Resources share-or-publish , troubleshooting , queued-gray-datasets , resources , usegalaxy-fr How to troubleshoot your work in Galaxy, and how to ask for help! :mag_right: Review your Job Details → inputs + parameters + logs using the i-icon inside of any dataset. :mortar_board: Learn with a tutorial and custom…	0	11051	November 28, 2018
Asking for unmapped genes in RNA sequencing via Galaxy troubleshooting , mapping , transcriptomics , resources , rna_star	1	9	August 25, 2025
Implement/enable "Manage Your Remote File Sources" on local version of galaxy usegalaxy.org support server-admin , resources	3	10	August 24, 2025
Eukaryote (Fasciola gigantica) assembly Resources assembly , resources	1	12	August 20, 2025
Help with RNA Star, Featurecounts, and reference annotation choices Resources transcriptomics , reference-annotation , resources , featurecounts	1	15	August 19, 2025
Qiime2 import troubleshooting: Retain original Illumnia file names + use simple list collection Resources resources , qiime2 , qiime2_core__tools__import	2	27	August 8, 2025
Job delays? How to check your job queues and how to work at multiple public UseGalaxy servers Resources workflow , queued-gray-datasets , server-status , resources	6	38	August 8, 2025
Downloading SnpEff database into history: Create database instead! Resources resources , snpeff	3	80	July 18, 2025
Correcting errors with NCBI FCS GX Foreign Contamination Screening assembled genomes Resources gtn-tutorial , workflow , resources , tool-help , ncbi_fcs_gx	1	56	July 17, 2025
Cut and run: MACS2 error Resources macs2 , epigenetics , resources , tool-help	6	30	July 9, 2025
Uploading large file problem Resources upload , tool-dev , resources	4	46	July 2, 2025
How can I rename a paired Fastq file? Resources collections , resources , fastq_manipulation	4	40	June 24, 2025
FAQ: NCBI reference data Resources reference-index , reference-annotation , reference-genome , resources	0	101	June 12, 2025
Error reported for fgsea - gene set enrichment tool Resources transcriptomics , resources , tool-help , fgsea	1	21	May 16, 2025
Length of Quality Sequence and Length of read do not match Resources resources , quality-control	1	690	April 18, 2025
RUVSeq:Fatal error: An undefined error occurred, please check your input carefully and contact your administrator Resources transcriptomics , reference-annotation , resources , tool-help , ruvseq	1	9	April 18, 2025
User Account Quotas, Memory and Concurrent jobs at UseGalaxy.eu Resources job-config , account , queued-gray-datasets , paused-jobs , resources	4	74	April 16, 2025
Linking mouse gene IDs/name to Encode IDs following Salmon and DESeq analysis Resources transcriptomics , resources , tool-help , salmon	3	28	July 22, 2025
Archived history Resources igv , history-archive , resources	3	26	April 1, 2025
How to solve problems in edgeR? Resources text-manipulation , troubleshooting , resources , tool-help , edger	2	45	March 13, 2025
Resolving memory failures with SPAdes Resources spades , exceeds-memory-error , resources , tool-help	2	64	March 17, 2025
SPAdes error -- running out of memory/not enough memory allocated for job Resources spades , exceeds-memory-error , resources	1	458	June 6, 2024
Allowlist guidence Resources server-admin , allowlist , resources	7	38	March 4, 2025
Quality Control Start Here! multQC issue and guidance? Resources multiqc , troubleshooting , collections , resources , quality-control , fastqc	1	68	March 3, 2025
Ensembl gene annotation gtf for rat problem with RNA STAR Resources troubleshooting , mapping , reference-annotation , reference-genome , resources	2	68	February 26, 2025
DESeq2 or EdgeR or Limma without replication Resources transcriptomics , resources , deseq2 , edger , limma_voom	9	4939	February 14, 2025
Read normalization Resources resources , tool-help , deseq2	4	50	July 22, 2025
Error with Visualize with Krona tool? Use Krona Pie Chart instead! Resources resources , tool-help , krona-text , taxonomy_krona_chart	1	48	January 28, 2025

How to get faster help with your question

share-or-publish , troubleshooting , resources

How to get faster help with your question We love details! :scientist: Consider Sharing your History or posting screenshots of your Job Information Details page. Questions with details attract the fastest replies! Pleas…

0

838

January 12, 2024

What should I do if my data exceeds the given 250GB of storage?

Resources

account , storage-dashboard , resources , manage-quota , scratch-space , usegalaxy-fr

I’m working on a transciptomics data which will probably exceed the given 250GB data. Is there any possible solution to this? for example increasing my storage?

1

1783

August 12, 2024

Troubleshooting resources for errors or unexpected results

Resources

share-or-publish , troubleshooting , queued-gray-datasets , resources , usegalaxy-fr

How to troubleshoot your work in Galaxy, and how to ask for help! :mag_right: Review your Job Details → inputs + parameters + logs using the i-icon inside of any dataset. :mortar_board: Learn with a tutorial and custom…

0

11051

November 28, 2018

Asking for unmapped genes in RNA sequencing via Galaxy

troubleshooting , mapping , transcriptomics , resources , rna_star