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miRNA alignment on Bowtie2/miRDeep
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1
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52
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November 15, 2025
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Running MiRDeep2 with pooled reads from MiRDeep2 Mapper
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4
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78
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August 28, 2025
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Datasets error and failure in DE analysis for mirna-seq
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2
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36
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May 2, 2026
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Can miRNA differential expression analysis be performed using a mRNA-like pipeline with a GTF file from miRBase?
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2
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138
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November 12, 2024
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Files for miRNA differential expression analysis
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9
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2250
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November 12, 2024
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miRDeep2 output
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3
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404
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November 8, 2023
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Identification of novel and known miRNAas using mirdeep2 in galaxy
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2
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565
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February 14, 2025
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EdgeR doesn´t run with count matrix in tabular format (obtained from mirDeep2 Quantifier)
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1
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648
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May 2, 2023
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Where to get precursor, mature, star miRNA for (MiRDeep2 Quantifier)
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2
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509
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April 7, 2026
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How to run miRNA analysis to identify miRNAs and for differential expression?
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3
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1326
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October 12, 2022
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DESeq2 with HISAT2 output?
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11
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1238
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July 22, 2025
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Is there a protocol for miRNA Sequencing?
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3
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855
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January 25, 2022
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Deduplication for miRNA analysis
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4
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1001
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September 27, 2021
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miRNA target prediction
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1
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448
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September 3, 2021
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miRNA featureCounts
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1
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833
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April 15, 2021
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MiRDeep2 identification of novel and known miRNAs
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29
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5495
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May 13, 2024
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Fasta format genome file in mirdeep2 (custom genome)
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3
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1866
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September 4, 2019
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identify MiRNAs(microRNAs) in RNA seq
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1
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933
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May 13, 2019
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