|
miRNA alignment on Bowtie2/miRDeep
|
|
1
|
80
|
November 15, 2025
|
|
Running MiRDeep2 with pooled reads from MiRDeep2 Mapper
|
|
4
|
103
|
August 28, 2025
|
|
Datasets error and failure in DE analysis for mirna-seq
|
|
1
|
62
|
March 5, 2025
|
|
Can miRNA differential expression analysis be performed using a mRNA-like pipeline with a GTF file from miRBase?
|
|
2
|
173
|
November 12, 2024
|
|
Files for miRNA differential expression analysis
|
|
8
|
2318
|
November 12, 2024
|
|
miRDeep2 output
|
|
3
|
418
|
November 8, 2023
|
|
Identification of novel and known miRNAas using mirdeep2 in galaxy
|
|
1
|
580
|
October 23, 2023
|
|
EdgeR doesn´t run with count matrix in tabular format (obtained from mirDeep2 Quantifier)
|
|
1
|
674
|
May 2, 2023
|
|
Where to get precursor, mature, star miRNA for (MiRDeep2 Quantifier)
|
|
1
|
526
|
November 23, 2022
|
|
How to run miRNA analysis to identify miRNAs and for differential expression?
|
|
3
|
1378
|
October 12, 2022
|
|
DESeq2 with HISAT2 output?
|
|
10
|
1292
|
April 29, 2022
|
|
Is there a protocol for miRNA Sequencing?
|
|
3
|
874
|
January 25, 2022
|
|
Deduplication for miRNA analysis
|
|
4
|
1018
|
September 27, 2021
|
|
miRNA target prediction
|
|
1
|
460
|
September 3, 2021
|
|
miRNA featureCounts
|
|
1
|
841
|
April 15, 2021
|
|
MiRDeep2 identification of novel and known miRNAs
|
|
28
|
5575
|
May 19, 2020
|
|
Fasta format genome file in mirdeep2 (custom genome)
|
|
3
|
1900
|
September 4, 2019
|
|
identify MiRNAs(microRNAs) in RNA seq
|
|
1
|
940
|
May 13, 2019
|